RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 SLC44A3Q8N4M1 653 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 OR6B3Q8NGW1 331 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 SSH3Q8TE77 659 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 KBTBD7Q8WVZ9 684 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 ANKS1AQ92625 1134 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 SNX21Q969T3 373 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 SPATA17Q96L03 361 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 SLC46A1Q96NT5 459 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 SORCS2Q96PQ0 1159 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 HEPHQ9BQS7 1158 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 AIFM2Q9BRQ8 373 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 TTYH3Q9C0H2 523 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 CCDC68Q9H2F9 335 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 ABCF3Q9NUQ8 709 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 XPR1Q9UBH6 696 aa6.54□□□□□ -1.36
SQLE-203ENST00000518931 EPN1Q9Y6I3 576 aaPredicted RBP6.54□□□□□ -1.36
SQLE-203ENST00000518931 A0A0B4J269 797 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 F5H0A9 414 aaPredicted RBP6.53□□□□□ -1.36
SQLE-203ENST00000518931 MYO1CO00159 1063 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 MYO1FO00160 1098 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 TBC1D4O60343 1298 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 ZBED4O75132 1171 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 ITGALP20701 1170 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 PPM1AP35813 382 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 AVPR1BP47901 424 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 SUMO3P55854 103 aaPredicted RBP6.53□□□□□ -1.36
SQLE-203ENST00000518931 TGFB2P61812 414 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 UBXN2AP68543 259 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 CTBP1Q13363 440 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 TUBB3Q13509 450 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 SPARCL1Q14515 664 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 PKN2Q16513 984 aaKnown RBP6.53□□□□□ -1.36
SQLE-203ENST00000518931 CCDC30Q5VVM6 783 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 NUGGCQ68CJ6 796 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 ENOSF1Q7L5Y1 443 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 MRGPRGQ86SM5 289 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 LDLRAD3Q86YD5 345 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 NRSN1Q8IZ57 195 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 OR2C3Q8N628 320 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 SLC15A4Q8N697 577 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 ADAMTS18Q8TE60 1221 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 LRTOMTQ8WZ04 291 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 LINC00476Q8WZB0 136 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 RADILQ96JH8 1075 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 ZSCAN31Q96LW9 406 aaPredicted RBP6.53□□□□□ -1.36
SQLE-203ENST00000518931 COQ10AQ96MF6 247 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 RIPOR3Q96MK2 946 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 ASB2Q96Q27 587 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 TBCBQ99426 244 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 SPATA5L1Q9BVQ7 753 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 UBN1Q9NPG3 1134 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 WASH6PQ9NQA3 447 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 RAI14Q9P0K7 980 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 WDR35Q9P2L0 1181 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 MTRRQ9UBK8 725 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 CPNE7Q9UBL6 633 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 HESX1Q9UBX0 185 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 HERC5Q9UII4 1024 aaKnown RBP6.53□□□□□ -1.36
SQLE-203ENST00000518931 ZNF112Q9UJU3 913 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 SLC13A4Q9UKG4 626 aa6.53□□□□□ -1.36
SQLE-203ENST00000518931 TRIAP1O43715 76 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 SOAT2O75908 522 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 GCP02774 474 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 DNTTP04053 509 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 APOA4P06727 396 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 EN2P19622 333 aaPredicted RBP6.52□□□□□ -1.37
SQLE-203ENST00000518931 SLC11A2P49281 568 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 PDE6CP51160 858 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 SEC24CP53992 1094 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 INHBCP55103 352 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 MAP2K1Q02750 393 aaPredicted RBP6.52□□□□□ -1.37
SQLE-203ENST00000518931 FOXI1Q12951 378 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 IQCB1Q15051 598 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 HECTD2Q5U5R9 776 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 RFX8Q6ZV50 586 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 VSIG1Q86XK7 387 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 GALNT13Q8IUC8 556 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 DNAJC5GQ8N7S2 189 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 MGARPQ8TDB4 240 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 LPIN2Q92539 896 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 SUCLG2Q96I99 432 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 TIGD1Q96MW7 591 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 SDF4Q9BRK5 362 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 MRIQ9BWK5 157 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 IRAK4Q9NWZ3 460 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 KCTD5Q9NXV2 234 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 IFT80Q9P2H3 777 aaPredicted RBP6.52□□□□□ -1.37
SQLE-203ENST00000518931 PACSIN3Q9UKS6 424 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 GPR34Q9UPC5 381 aa6.52□□□□□ -1.37
SQLE-203ENST00000518931 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.52□□□□□ -1.37
SQLE-203ENST00000518931 MAST3O60307 1309 aa6.51□□□□□ -1.37
SQLE-203ENST00000518931 DCLK1O15075 740 aa6.51□□□□□ -1.37
SQLE-203ENST00000518931 MGEA5O60502 916 aa6.51□□□□□ -1.37
SQLE-203ENST00000518931 B3GALNT1O75752 331 aa6.51□□□□□ -1.37
SQLE-203ENST00000518931 ESRRBO95718 433 aa6.51□□□□□ -1.37
SQLE-203ENST00000518931 CCDC175P0C221 793 aa6.51□□□□□ -1.37
SQLE-203ENST00000518931 DHRS4L1P0CG22 281 aa6.51□□□□□ -1.37
SQLE-203ENST00000518931 MYF5P13349 255 aa6.51□□□□□ -1.37
SQLE-203ENST00000518931 BRAFP15056 766 aa6.51□□□□□ -1.37
SQLE-203ENST00000518931 PPP3CBP16298 524 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms