RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-204	ENST00000517801	SLC27A6	Q9Y2P4	619 aa		6.11	□□□□□ -1.43
FAM49B-204	ENST00000517801		A0A087X1B8	175 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801		A8MVJ9	347 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	EXOC5	O00471	708 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	PCDH17	O14917	1159 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	ZSCAN9	O15535	394 aa	Predicted RBP	6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	URI1	O94763	535 aa	Predicted RBP	6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	TJP3	O95049	919 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	HTR7	P34969	479 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	GRIA3	P42263	894 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	CCT5	P48643	541 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	SUMO2	P61956	95 aa	Known RBP	6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	PRKG1	Q13976	671 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	ZNF169	Q14929	603 aa	Predicted RBP	6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	ACOX1	Q15067	660 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	LCE5A	Q5TCM9	118 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	PEG10	Q86TG7	708 aa	Known RBP	6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	CPXCR1	Q8N123	301 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	HAPLN3	Q96S86	360 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	DPCD	Q9BVM2	203 aa	Predicted RBP	6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	ARHGEF3	Q9NR81	526 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	DKK3	Q9UBP4	350 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	GRHPR	Q9UBQ7	328 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	NFU1	Q9UMS0	254 aa		6.1	□□□□□ -1.43
FAM49B-204	ENST00000517801	TRIM38	O00635	465 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	AKAP8	O43823	692 aa	Known RBP	6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	WDR47	O94967	919 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	TNFRSF6B	O95407	300 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	ERBB2	P04626	1255 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	ANXA6	P08133	673 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	NR2F6	P10588	404 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	VEGFA	P15692	232 aa	Predicted RBP	6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	GK	P32189	559 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	PLA2G5	P39877	138 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	PPM1F	P49593	454 aa	Predicted RBP	6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	DGKQ	P52824	942 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	EIF4A1	P60842	406 aa	Known RBP	6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	FHL3	Q13643	280 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	HSP90AB4P	Q58FF6	505 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	ANKRD16	Q6P6B7	361 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	KLHL17	Q6TDP4	642 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	LDHAL6A	Q6ZMR3	332 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	PARS2	Q7L3T8	475 aa	Known RBP	6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	SMAP1	Q8IYB5	467 aa	Predicted RBP	6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	NGDN	Q8NEJ9	315 aa	Known RBP	6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	WDR60	Q8WVS4	1066 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	XAGE5	Q8WWM1	108 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	PDLIM2	Q96JY6	352 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	SERTAD4	Q9NUC0	356 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	FOXJ2	Q9P0K8	574 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	LUZP4	Q9P127	313 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	DGKB	Q9Y6T7	804 aa		6.09	□□□□□ -1.43
FAM49B-204	ENST00000517801	PNMA6E	A0A0J9YXQ4	647 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801		J3KTA2	159 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	CBFA2T3	O75081	653 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	PMPCB	O75439	489 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	VNN1	O95497	513 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	SLPI	P03973	132 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	TMEM225B	P0DP42	221 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	HSD3B1	P14060	373 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	PROZ	P22891	400 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	CXCR5	P32302	372 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	PDE1A	P54750	535 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	TGFB2	P61812	414 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	CSHL1	Q14406	222 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	TBC1D25	Q3MII6	688 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	ATPAF1	Q5TC12	328 aa	Predicted RBP	6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	DENND2C	Q68D51	928 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	ZNF354C	Q86Y25	554 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	GALNT15	Q8N3T1	639 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	LRRC71	Q8N4P6	559 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	SIRT6	Q8N6T7	355 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	C11orf44	Q8N8P7	122 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	STT3B	Q8TCJ2	826 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	VPS50	Q96JG6	964 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	RTKN	Q9BST9	563 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	TMPRSS5	Q9H3S3	457 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	RXFP3	Q9NSD7	469 aa		6.08	□□□□□ -1.44
FAM49B-204	ENST00000517801	GCOM1	H8Y6P7	765 aa	Predicted RBP	6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	FCHO1	O14526	889 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	DHH	O43323	396 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	USP1	O94782	785 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	ACTL6B	O94805	426 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	TTLL1	O95922	423 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	DHRS4L1	P0CG22	281 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	PCSK6	P29122	969 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	SIM1	P81133	766 aa	Predicted RBP	6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	PPFIA1	Q13136	1202 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	BIRC3	Q13489	604 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	ERCC6L	Q2NKX8	1250 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	PCSK4	Q6UW60	755 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	RINL	Q6ZS11	566 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801		Q6ZWC4	215 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	CCDC117	Q8IWD4	279 aa	Predicted RBP	6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	CLASRP	Q8N2M8	674 aa	Known RBP	6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	METTL25	Q8N6Q8	603 aa		6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	OTUD7A	Q8TE49	926 aa	Predicted RBP	6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	CCNL1	Q9UK58	526 aa	Predicted RBP	6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	SCAF8	Q9UPN6	1271 aa	Known RBP	6.07	□□□□□ -1.44
FAM49B-204	ENST00000517801	DMRT1	Q9Y5R6	373 aa		6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms