RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 WDR49Q8IV35 697 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 ZCCHC9Q8N567 271 aaKnown RBP9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 ZSWIM2Q8NEG5 633 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 ERLEC1Q96DZ1 483 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 FAM84AQ96KN4 292 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 PHF12Q96QT6 1004 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 UBL7Q96S82 380 aaPredicted RBP9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 GABRG3Q99928 467 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 CBWD1Q9BRT8 395 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 MED10Q9BTT4 135 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 STRA6Q9BX79 667 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 ZNF518BQ9C0D4 1074 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 GAREM1Q9H706 876 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 KIAA1586Q9HCI6 787 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 OLFML3Q9NRN5 406 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 TM7SF3Q9NS93 570 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 WDR35Q9P2L0 1181 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 NFE2L3Q9Y4A8 694 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 RAD54BQ9Y620 910 aa9.61□□□□□ -0.87
LINCR-0001-201ENST00000517732 DMXL2Q8TDJ6 3036 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 BCAT2O15382 392 aaPredicted RBP9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 CACNG3O60359 315 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 CBFA2T3O75081 653 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 GABBR2O75899 941 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 TYRP14679 529 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 TNNI1P19237 187 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 OXTRP30559 389 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 ABCG1P45844 678 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 ZNF132P52740 706 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 TRPC3Q13507 836 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 RRAGBQ5VZM2 374 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 SLCO6A1Q86UG4 719 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 MIB1Q86YT6 1006 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 SCUBE3Q8IX30 993 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 B3GALNT2Q8NCR0 500 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 CADM4Q8NFZ8 388 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 OR5B17Q8NGF7 314 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 RHBDD1Q8TEB9 315 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 UCMAQ8WVF2 138 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 DNASE2BQ8WZ79 361 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 TOE1Q96GM8 510 aaKnown RBP9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 ZFRQ96KR1 1074 aaKnown RBP9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 MRGPRX1Q96LB2 322 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 ACOX2Q99424 681 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 MRPL45Q9BRJ2 306 aaKnown RBP9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 GPR174Q9BXC1 333 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 CCSER2Q9H7U1 834 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 PRDM16Q9HAZ2 1276 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 DMAP1Q9NPF5 467 aaPredicted RBP9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 COMMD8Q9NX08 183 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 CHORDC1Q9UHD1 332 aaPredicted RBP9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 KNTC1P50748 2209 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 ASXL3Q9C0F0 2248 aa9.6□□□□□ -0.87
LINCR-0001-201ENST00000517732 KNL1Q8NG31 2342 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 GOLGA8CPA6NN73 597 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 CLDN5O00501 218 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 NPC1O15118 1278 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 TRIM24O15164 1050 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 TLR5O60602 858 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 CILPO75339 1184 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 DLATP10515 647 aaKnown RBP9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 ACADMP11310 421 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 TRIM21P19474 475 aaKnown RBP9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 GJB2P29033 226 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 SLC5A3P53794 718 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 CACNA2D1P54289 1103 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 GRIN1Q05586 938 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 CYP4F3Q08477 520 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 SF3A1Q15459 793 aaKnown RBP9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 INAVAQ3KP66 663 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 WDR72Q3MJ13 1102 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 DCAF12L1Q5VU92 463 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 SNX30Q5VWJ9 437 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 SCARA3Q6AZY7 606 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 TPGS1Q6ZTW0 290 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 HTR3DQ70Z44 454 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 TRAPPC11Q7Z392 1133 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 BRAPQ7Z569 592 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 METTL3Q86U44 580 aaKnown RBP9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 CCDC65Q8IXS2 484 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 PDCD7Q8N8D1 485 aaKnown RBP9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 SMARCD1Q96GM5 515 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 TNIP3Q96KP6 325 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 BBC3Q96PG8 261 aaPredicted RBP9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 B3GNT5Q9BYG0 378 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 SLC6A17Q9H1V8 727 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 DPEP3Q9H4B8 488 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 FBXO44Q9H4M3 255 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 TLR8Q9NR97 1041 aaKnown RBP9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 PANK4Q9NVE7 773 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 CACNA2D2Q9NY47 1150 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 WSB2Q9NYS7 404 aaPredicted RBP9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 MARK1Q9P0L2 795 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 GMIPQ9P107 970 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 PCDHGB2Q9Y5G2 931 aa9.59□□□□□ -0.87
LINCR-0001-201ENST00000517732 PTPRJQ12913 1337 aa9.58□□□□□ -0.88
LINCR-0001-201ENST00000517732 MYLKQ15746 1914 aa9.58□□□□□ -0.88
LINCR-0001-201ENST00000517732 A0A087WV48 116 aa9.58□□□□□ -0.88
LINCR-0001-201ENST00000517732 TRABD2BA6NFA1 517 aa9.58□□□□□ -0.88
LINCR-0001-201ENST00000517732 PRRT4C9JH25 899 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms