RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 APBB2Q92870 758 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 TRIM63Q969Q1 353 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 DHX58Q96C10 678 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 AHCYL2Q96HN2 611 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 AARSD1Q9BTE6 412 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 SCAND2PQ9GZW5 306 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 TMPRSS5Q9H3S3 457 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 AGO3Q9H9G7 860 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 TOPORSQ9NS56 1045 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 C14orf119Q9NWQ9 140 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CHMP5Q9NZZ3 219 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 ARHGAP28Q9P2N2 729 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RCOR1Q9UKL0 485 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 PADI3Q9ULW8 664 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 NOC2LQ9Y3T9 749 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 TTLL3Q9Y4R7 772 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 A0A1B0GVL5 298 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 TRIM64A6NGJ6 449 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 TRIM64BA6NI03 449 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 GRXCR1A8MXD5 290 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 RASA4BC9J798 803 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 K7ESF4 209 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 AGRPO00253 132 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 EIF3FO00303 357 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 POLR2DO15514 142 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 RASA4O43374 803 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 XPOTO43592 962 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 NCK2O43639 380 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 AHCYL1O43865 530 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 EFCAB14O75071 495 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 TBCAO75347 108 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 H2AFYO75367 372 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 ERLIN2O94905 339 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 FKBP9O95302 570 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ZBED1O96006 694 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 POLBP06746 335 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 IDEP14735 1019 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CD247P20963 164 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 XPAP23025 273 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 SFPQP23246 707 aaKnown RBP eCLIP2.97□□□□□ -1.93
SKP1-204ENST00000517691 GLRA2P23416 452 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PSMA3P25788 255 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CNTFP26441 200 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ARL2P36404 184 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 TUBP50607 506 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SLC12A3P55017 1021 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PEX3P56589 373 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 IL2P60568 153 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 WDR5P61964 334 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 RAC1P63000 192 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 DEFB103AP81534 67 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 DMP1Q13316 513 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 AUHQ13825 339 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 CAPSQ13938 189 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SF1Q15637 639 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 TMEM119Q4V9L6 283 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CCDC38Q502W7 563 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 NUGGCQ68CJ6 796 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 FAM109BQ6ICB4 259 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 PLBD1Q6P4A8 553 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SHC4Q6S5L8 630 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.97□□□□□ -1.93
SKP1-204ENST00000517691 C1orf186Q6ZWK4 172 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 FKBP9P1Q75LS8 142 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PDZD4Q76G19 769 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 ENOSF1Q7L5Y1 443 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 OVCH2Q7RTZ1 564 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SRGAP1Q7Z6B7 1085 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 C11orf74Q86VG3 221 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ZNF410Q86VK4 478 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PTRH1Q86Y79 214 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.97□□□□□ -1.93
SKP1-204ENST00000517691 ZBTB8OSQ8IWT0 167 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CEP57L1Q8IYX8 460 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ARHGEF39Q8N4T4 335 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 LINC01465Q8N7H1 131 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SYT2Q8N9I0 419 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 IQUBQ8NA54 791 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ZSCAN18Q8TBC5 510 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 LARP4BQ92615 738 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 HDAC2Q92769 488 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 STAMQ92783 540 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 KIFAP3Q92845 792 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 BORCS6Q96GS4 357 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 MEGF10Q96KG7 1140 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 KREMEN1Q96MU8 473 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 YME1L1Q96TA2 773 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ADAM2Q99965 735 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 NUDT16L1Q9BRJ7 211 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 FTHL17Q9BXU8 183 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CCSER1Q9C0I3 900 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 RNF38Q9H0F5 515 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ACSS3Q9H6R3 686 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 GP6Q9HCN6 339 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ERVK-5Q9HDB9 667 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 XPNPEP1Q9NQW7 623 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 NKIRAS2Q9NYR9 191 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 MSRAQ9UJ68 235 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms