RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 GOLGA8FQ08AF8 430 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 GOLGA8DPQ0D2H9 430 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 PEAR1Q5VY43 1037 aaPredicted RBP16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 KIAA1324Q6UXG2 1013 aaKnown RBP16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 RABEPKQ7Z6M1 372 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 CHCHD4Q8N4Q1 142 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 IQUBQ8NA54 791 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 IPO4Q8TEX9 1081 aaKnown RBP16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 XPO6Q96QU8 1125 aaKnown RBP16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 GZF1Q9H116 711 aaPredicted RBP16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 SLC6A17Q9H1V8 727 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 SLC39A2Q9NP94 309 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 FAM49BQ9NUQ9 324 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 LSM7Q9UK45 103 aaKnown RBP16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 HCN2Q9UL51 889 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 MSRB2Q9Y3D2 182 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 PTPRDP23468 1912 aa16.11■□□□□ 0.17
CSGALNACT1-204ENST00000517494 A0A1W2PQF6 199 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 ARHGAP33O14559 1287 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 ZNF217O75362 1048 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 TBX18O95935 607 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 SYPP08247 313 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 TYRP14679 529 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 ADORA2BP29275 332 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 PGFP49763 221 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 NCOA4Q13772 614 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 PLEKHG6Q3KR16 790 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 SNX30Q5VWJ9 437 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 TOGARAM2Q6ZUX3 1019 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 PAQR9Q6ZVX9 377 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 SLC41A1Q8IVJ1 513 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 FUKQ8N0W3 1084 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 LINC00301Q8NCQ3 95 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 SLC2A14Q8TDB8 520 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 SDCBP2Q9H190 292 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 CAPN10Q9HC96 672 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 CD93Q9NPY3 652 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 TLR8Q9NR97 1041 aaKnown RBP16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 CACNA2D2Q9NY47 1150 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 TFIP11Q9UBB9 837 aaKnown RBP16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 LHX6Q9UPM6 363 aa16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 MORC2Q9Y6X9 1032 aaPredicted RBP16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 ASCC3Q8N3C0 2202 aaKnown RBP16.1■□□□□ 0.17
CSGALNACT1-204ENST00000517494 UPK3BL1B0FP48 263 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 UPK3BL2E5RIL1 263 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 BEST1O76090 585 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 ZDHHC11BP0C7U3 371 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 SNRPFP62306 86 aaKnown RBP16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 RING1Q06587 406 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 UNC13DQ70J99 1090 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 ZMIZ2Q8NF64 920 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 PLEKHO2Q8TD55 490 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 CAMK1GQ96NX5 476 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 SMOQ99835 787 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 C7orf25Q9BPX7 421 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 FBXO44Q9H4M3 255 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 COMMD8Q9NX08 183 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 PLK2Q9NYY3 685 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 WDR35Q9P2L0 1181 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 HMGXB4Q9UGU5 601 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 PCDHB9Q9Y5E1 797 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 AKAP13Q12802 2813 aa16.09■□□□□ 0.17
CSGALNACT1-204ENST00000517494 ZFYVE26Q68DK2 2539 aa16.08■□□□□ 0.17
CSGALNACT1-204ENST00000517494 MYOFQ9NZM1 2061 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 LRRIQ3A6PVS8 624 aaPredicted RBP16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 MEI4A8MW99 385 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 PRRT4C9JH25 899 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 H0Y626 953 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 MDM4O15151 490 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 POLR2DO15514 142 aaKnown RBP16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 CYP26A1O43174 497 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 STX6O43752 255 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 SH3BP5O60239 455 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 CACNG3O60359 315 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 TRIM16O95361 564 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 P4HA1P13674 534 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 MAOBP27338 520 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 ATP5C1P36542 298 aaKnown RBP16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 AFMP43652 599 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 DGKGP49619 791 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 NDST1P52848 882 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 KNOP1Q1ED39 458 aaKnown RBP16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 FOXD4L6Q3SYB3 417 aaPredicted RBP16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 SYCP2LQ5T4T6 812 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 SHC4Q6S5L8 630 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 FOXD4L3Q6VB84 417 aaPredicted RBP16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 HTR3DQ70Z44 454 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 ZNF396Q96N95 335 aaPredicted RBP16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 KLF16Q9BXK1 252 aaPredicted RBP16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 VRTNQ9H8Y1 702 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 IL37Q9NZH6 218 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 NUDT5Q9UKK9 219 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 STARD13Q9Y3M8 1113 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 GON4LQ3T8J9 2241 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 CACNA1EQ15878 2313 aa16.08■□□□□ 0.16
CSGALNACT1-204ENST00000517494 ATRXP46100 2492 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms