RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 MPP7Q5T2T1 576 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 NFXL1Q6ZNB6 911 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SLCO4C1Q6ZQN7 724 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 C22orf34Q6ZV56 151 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CHSY3Q70JA7 882 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 PPP1R42Q7Z4L9 355 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 BMP8AQ7Z5Y6 402 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 ADGRA1Q86SQ6 560 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SYT2Q8N9I0 419 aaPredicted RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 FSIP1Q8NA03 581 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 OR7D4Q8NG98 312 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CTCFLQ8NI51 663 aaPredicted RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 FBXO30Q8TB52 745 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 BICD2Q8TD16 824 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SAAL1Q96ER3 474 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 BICD1Q96G01 975 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 FCRL2Q96LA5 508 aaPredicted RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 FER1L6-AS2Q96M78 137 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 LENG8Q96PV6 779 aaPredicted RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 PIP5K1AQ99755 562 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CPEB1Q9BZB8 566 aaKnown RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 TTYH1Q9H313 450 aaPredicted RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 ST6GALNAC4Q9H4F1 302 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 STN1Q9H668 368 aaKnown RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SENP2Q9HC62 589 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SEMA4BQ9NPR2 832 aaPredicted RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SPATA6Q9NWH7 488 aaPredicted RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 PPP1R14DQ9NXH3 145 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CGNQ9P2M7 1197 aaKnown RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 XPR1Q9UBH6 696 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CACNG4Q9UBN1 327 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 DKK4Q9UBT3 224 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 DNAI1Q9UI46 699 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CTNNA3Q9UI47 895 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CPSF3Q9UKF6 684 aaKnown RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SARDHQ9UL12 918 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 BAG5Q9UL15 447 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 PALD1Q9ULE6 856 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 ATP11BQ9Y2G3 1177 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 PLEKHM1Q9Y4G2 1056 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 ANGPTL3Q9Y5C1 460 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 TRPV2Q9Y5S1 764 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 A0A1W2PQJ5 194 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 ARHGEF37A1IGU5 675 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 FRMD3A2A2Y4 597 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 A4D1N5 150 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 RGSL1A5PLK6 1076 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 K7EPI3 171 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 CTDSP2O14595 271 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 ZNF263O14978 683 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 SYN3O14994 580 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 GRM6O15303 877 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 SEPT4O43236 478 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 TAF5LO75529 589 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 USP2O75604 605 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 RPP40O75818 363 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 ALX3O95076 343 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 KIF20AO95235 890 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 APBB3O95704 486 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 CER1O95813 267 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 PNPP00491 289 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 EIF2S1P05198 315 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 TPOP07202 933 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 HEXBP07686 556 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 CCDC159P0C7I6 412 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 FDPSP14324 419 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 RPS2P15880 293 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 FPR1P21462 350 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 IL4RP24394 825 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 YY1P25490 414 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 PTPN7P35236 360 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 BMPR1AP36894 532 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 MTHFRP42898 656 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 SLC6A11P48066 632 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 NRIP1P48552 1158 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 MRPL12P52815 198 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 POLGP54098 1239 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 HDAC4P56524 1084 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 SLC26A5P58743 744 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 EIF4A1P60842 406 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 MEF2AQ02078 507 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 TBL3Q12788 808 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 TMEM115Q12893 351 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 RPA4Q13156 261 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 ATP1A4Q13733 1029 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 RCN2Q14257 317 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 GAS6Q14393 721 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 LASP1Q14847 261 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 MORF4L2Q15014 288 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 NFKBIBQ15653 356 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 MST1LQ2TV78 715 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 C19orf54Q5BKX5 351 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 ZNF569Q5MCW4 686 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 CBWD5Q5RIA9 395 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 ATXN7L2Q5T6C5 722 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 FCRL6Q6DN72 434 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 GRAMD4Q6IC98 578 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 DGAT2L7PQ6IED9 249 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 MED25Q71SY5 747 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms