RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 INPP5DQ92835 1189 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ERCC4Q92889 916 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 BICD1Q96G01 975 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 URB1-AS1Q96HZ7 61 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SEC16BQ96JE7 1060 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CALR3Q96L12 384 aaKnown RBP-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CCDC17Q96LX7 622 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KLHL32Q96NJ5 620 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PKP2Q99959 881 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MGME1Q9BQP7 344 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SYT11Q9BT88 431 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FSD1Q9BTV5 496 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 RPP25Q9BUL9 199 aaKnown RBP-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MXD3Q9BW11 206 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TRIM6Q9C030 488 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MTG2Q9H4K7 406 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GAREM1Q9H706 876 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PAPOLBQ9NRJ5 636 aaKnown RBP-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SIRT3Q9NTG7 399 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FBXO34Q9NWN3 711 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 BARHL2Q9NY43 387 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZDHHC2Q9UIJ5 367 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 AGO2Q9UKV8 859 aaKnown RBP-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SLC8A2Q9UPR5 921 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SAMHD1Q9Y3Z3 626 aaKnown RBP-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TNPO3Q9Y5L0 923 aaKnown RBP-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 B3GALT1Q9Y5Z6 326 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NUMBLQ9Y6R0 609 aa-0.52□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CCDC195A0A1B0GUA6 201 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 UBA6A0AVT1 1052 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MAGEA13PA6NCF6 341 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PRR32B1ATL7 298 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ARVCFO00192 962 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CLGNO14967 610 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SLC16A3O15427 465 aaKnown RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MAGEB4O15481 346 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TRIAP1O43715 76 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 AIREO43918 545 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PDE8BO95263 885 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LCATP04180 440 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ATP1A1P05023 1023 aaKnown RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ITGA2BP08514 1039 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SRCP12931 536 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ALOX15P16050 662 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ATP5JP18859 108 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KRT15P19012 456 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ITGB8P26012 769 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GNA15P30679 374 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LIPAP38571 399 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KIR3DL2P43630 455 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FNTBP49356 437 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 RASSF2P50749 326 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CLCN2P51788 898 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MEF2AQ02078 507 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF844Q08AG5 666 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 COX10Q12887 443 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 EBI3Q14213 229 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NEDD9Q14511 834 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LARS2Q15031 903 aaKnown RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 C15orf32Q32M92 178 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TAF1BQ53T94 588 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 C19orf54Q5BKX5 351 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 EARS2Q5JPH6 523 aaKnown RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TTC38Q5R3I4 469 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PRAMEF9Q5VWM5 478 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TTC19Q6DKK2 380 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PAQR6Q6TCH4 344 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PARM1Q6UWI2 310 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LCTLQ6UWM7 567 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TIFABQ6ZNK6 161 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 Q6ZWC4 215 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TUBA1AQ71U36 451 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF534Q76KX8 674 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KANSL1Q7Z3B3 1105 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF572Q7Z3I7 529 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 OSTM1Q86WC4 334 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GPD1LQ8N335 351 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CIARTQ8N365 385 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FAM109AQ8N4B1 249 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LRRC71Q8N4P6 559 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FITM2Q8N6M3 262 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ATP11CQ8NB49 1132 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 RBBP8NLQ8NC74 664 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NSUN7Q8NE18 718 aaKnown RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TMEM171Q8WVE6 324 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 APBA2Q99767 749 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NOL10Q9BSC4 688 aaKnown RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ALG1Q9BT22 464 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MRI1Q9BV20 369 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ELOVL1Q9BW60 279 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SCNM1Q9BWG6 230 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LGR4Q9BXB1 951 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 AMBRA1Q9C0C7 1298 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FZD8Q9H461 694 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TASP1Q9H6P5 420 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FBRSL1Q9HCM7 1045 aaKnown RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KRCC1Q9NPI7 259 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MKKSQ9NPJ1 570 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TNFRSF19Q9NS68 423 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms