RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 SEC23BQ15437 767 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 SLC9C1Q4G0N8 1177 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 PIP4P1Q86T03 277 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 YAF2Q8IY57 180 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 PNPLA1Q8N8W4 532 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 MPLKIPQ8TAP9 179 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 WASF1Q92558 559 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 EDC3Q96F86 508 aaKnown RBP3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 VPS50Q96JG6 964 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 TRMOQ9BU70 441 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 C22orf23Q9BZE7 217 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 FAM204AQ9H8W3 233 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 C1orf112Q9NSG2 853 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 TMEM184CQ9NVA4 438 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 STK32BQ9NY57 414 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 CPNE7Q9UBL6 633 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 L1RE1Q9UN81 338 aa3.55□□□□□ -1.84
RNU4-49P-201ENST00000516080 CD8B2A6NJW9 211 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 SNX2O60749 519 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 TULP3O75386 442 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 PARP1P09874 1014 aaKnown RBP3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZKSCAN1P17029 563 aaPredicted RBP3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 TPH1P17752 444 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 ADRA1DP25100 572 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 ACVR2AP27037 513 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 TACR3P29371 465 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 CPT1AP50416 773 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 CACNB3P54284 484 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 MFSD13AQ14CX5 517 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 CNN3Q15417 329 aaKnown RBP3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 CNGA2Q16280 664 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 GPR162Q16538 588 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 PFKFB3Q16875 520 aaPredicted RBP3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 LEXMQ3ZCV2 418 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 MINDY4Q4G0A6 757 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 SWSAP1Q6NVH7 229 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 MZT2AQ6P582 158 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 APOA5Q6Q788 366 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 PIM3Q86V86 326 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 COL23A1Q86Y22 540 aaPredicted RBP3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 ARFGAP1Q8N6T3 406 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 IPCEF1Q8WWN9 437 aaPredicted RBP3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZFYVE19Q96K21 471 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 MARK4Q96L34 752 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 HEY2Q9UBP5 337 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 STEAP1Q9UHE8 339 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 HS3ST3B1Q9Y662 390 aa3.54□□□□□ -1.84
RNU4-49P-201ENST00000516080 H3BNX3 289 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 RAB27BO00194 218 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 PRPF3O43395 683 aaKnown RBP3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 CRYABP02511 175 aaKnown RBP3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 CD63P08962 238 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 TXNP10599 105 aaKnown RBP3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 CYP19A1P11511 503 aaPredicted RBP3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 MCM5P33992 734 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 ITGA8P53708 1063 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 GPC5P78333 572 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 TXNL4AP83876 142 aaKnown RBP3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 STK3Q13188 491 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 SLC14A1Q13336 389 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 STIM1Q13586 685 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 CLCA4Q14CN2 919 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 FAM110CQ1W6H9 321 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 MIDNQ504T8 468 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 FAM71DQ8N9W8 422 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 ZDHHC12Q96GR4 267 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 HIST1H2AAQ96QV6 131 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 LRRC27Q9C0I9 530 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 DNAJB11Q9UBS4 358 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 DKK4Q9UBT3 224 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 OGDHLQ9ULD0 1010 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 RIMKLBQ9ULI2 386 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 FZD4Q9ULV1 537 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 SQORQ9Y6N5 450 aa3.53□□□□□ -1.84
RNU4-49P-201ENST00000516080 SPATA31A1Q5TZJ5 1347 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 CNTNAP2Q9UHC6 1331 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 AGPSO00116 658 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 FYB1O15117 783 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 USP12O75317 370 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 PSG1P11464 419 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 CPA2P48052 419 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 EIF4A1P60842 406 aaKnown RBP3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 RPS16P62249 146 aaKnown RBP3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 YPEL5P62699 121 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 FMO1Q01740 532 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 DEUP1Q05D60 604 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 C3orf38Q5JPI3 329 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 KIAA1161Q6NSJ0 714 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 LVRNQ6Q4G3 990 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 C9orf47Q6ZRZ4 202 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 METTL25Q8N6Q8 603 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 C11orf44Q8N8P7 122 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 KAZALD1Q96I82 304 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 LYZL4Q96KX0 146 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 CINPQ9BW66 212 aaPredicted RBP3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 USP29Q9HBJ7 922 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 ZNF287Q9HBT7 754 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 WWOXQ9NZC7 414 aa3.52□□□□□ -1.85
RNU4-49P-201ENST00000516080 MID2Q9UJV3 735 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms