RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 MAATS1Q7Z4T9 603 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 FAM131BQ86XD5 332 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 PYROXD2Q8N2H3 581 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 CCDC185Q8N715 623 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 CCDC26Q8TAB7 109 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 RIN2Q8WYP3 895 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-213ENST00000515418 SLC2A13Q96QE2 648 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 DCLK3Q9C098 648 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 DPH5Q9H2P9 285 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 SLITRK6Q9H5Y7 841 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 C10orf88Q9H8K7 445 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 ARFGAP3Q9NP61 516 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 IL23AQ9NPF7 189 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 CNGB3Q9NQW8 809 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 GDF3Q9NR23 364 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 CXXC1Q9P0U4 656 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-213ENST00000515418 NFU1Q9UMS0 254 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 CDY1Q9Y6F8 540 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 PTPRSQ13332 1948 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 PDE4DIPQ5VU43 2346 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 DAPK3O43293 454 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 TBC1D4O60343 1298 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 CST8O60676 142 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 FBXO21O94952 628 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 TJP3O95049 919 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 EFEMP2O95967 443 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 LTFP02788 710 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 IL4RP24394 825 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 OR1D2P34982 312 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 NOS2P35228 1153 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 CETN2P41208 172 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 ARSEP51690 589 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 SLC5A3P53794 718 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 DUSP4Q13115 394 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 TRIP13Q15645 432 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-213ENST00000515418 CYP1B1Q16678 543 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 BOLA3Q53S33 107 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 PPP6R3Q5H9R7 873 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-213ENST00000515418 PM20D1Q6GTS8 502 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 ZNF280DQ6N043 979 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 B4GALNT4Q76KP1 1039 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 PRUNE1Q86TP1 453 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 IFT20Q8IY31 132 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 SLC7A14Q8TBB6 771 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 NT5C3BQ969T7 300 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 NPY6RQ99463 290 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 SNRNP25Q9BV90 132 aaKnown RBP9.55□□□□□ -0.88
CPNE4-213ENST00000515418 LRRC19Q9H756 370 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 RC3H2Q9HBD1 1191 aaKnown RBP9.55□□□□□ -0.88
CPNE4-213ENST00000515418 PIGVQ9NUD9 493 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 PCYOX1Q9UHG3 505 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 NUDT5Q9UKK9 219 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 PCDHB5Q9Y5E4 795 aa9.55□□□□□ -0.88
CPNE4-213ENST00000515418 OR6C75A6NL08 312 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 DAB1O75553 588 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 FGBP02675 491 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 FAM153BP0C7A2 387 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 L1CAMP32004 1257 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 COPS2P61201 443 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 USP46P62068 366 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 ELAVL2Q12926 359 aaKnown RBP9.54□□□□□ -0.88
CPNE4-213ENST00000515418 GPR17Q13304 367 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 DPYSL3Q14195 570 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 KRT81Q14533 505 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 NFE2Q16621 373 aaPredicted RBP9.54□□□□□ -0.88
CPNE4-213ENST00000515418 USP41Q3LFD5 358 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 FAM153CQ494X1 144 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 ERMARDQ5T6L9 678 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 KIAA1841Q6NSI8 718 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 ANKS3Q6ZW76 656 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 JAMLQ86YT9 394 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 RFX6Q8HWS3 928 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 C7orf61Q8IZ16 206 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 FBXO22Q8NEZ5 403 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 AUTS2Q8WXX7 1259 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 YME1L1Q96TA2 773 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 DHX35Q9H5Z1 703 aaKnown RBP9.54□□□□□ -0.88
CPNE4-213ENST00000515418 PRKAG2Q9UGJ0 569 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 FAM153AQ9UHL3 310 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 DNPEPQ9ULA0 475 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 SNX24Q9Y343 169 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 USP3Q9Y6I4 520 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 MTMR11A4FU01 709 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 SASH3O75995 380 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 ENDOD1O94919 500 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 TUBBP07437 444 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 MTMR3Q13615 1198 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 CCNG2Q16589 344 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 TAZQ16635 292 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 MGAT5BQ3V5L5 792 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 NPNTQ6UXI9 565 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 SCD5Q86SK9 330 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 C12orf50Q8NA57 414 aaPredicted RBP9.54□□□□□ -0.88
CPNE4-213ENST00000515418 COLGALT1Q8NBJ5 622 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 LRRN4Q8WUT4 740 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 HNRNPLLQ8WVV9 542 aaKnown RBP9.54□□□□□ -0.88
CPNE4-213ENST00000515418 MAIP1Q8WWC4 291 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 CCDC114Q96M63 670 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 ZNF558Q96NG5 402 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 SEPT5Q99719 369 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms