RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 DCAF12L1Q5VU92 463 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 DEFB128Q7Z7B8 93 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 PHLDB2Q86SQ0 1253 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 SPATA2LQ8IUW3 424 aaPredicted RBP10.33□□□□□ -0.76
TPM3-221ENST00000513769 CMTR2Q8IYT2 770 aaKnown RBP10.33□□□□□ -0.76
TPM3-221ENST00000513769 SIX6OS1Q8N1H7 587 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 ZNF276Q8N554 614 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 C12orf50Q8NA57 414 aaPredicted RBP10.33□□□□□ -0.76
TPM3-221ENST00000513769 ATL2Q8NHH9 583 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 JOSD2Q8TAC2 188 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 FAM71BQ8TC56 605 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 SPPL2BQ8TCT7 592 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 SEC14L1Q92503 715 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 SMOQ99835 787 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 OSBPL8Q9BZF1 889 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 TRIM7Q9C029 511 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 RAB17Q9H0T7 212 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 FBXO44Q9H4M3 255 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 ANKZF1Q9H8Y5 726 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 POPDC2Q9HBU9 364 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 ARFGAP3Q9NP61 516 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 DMAP1Q9NPF5 467 aaPredicted RBP10.33□□□□□ -0.76
TPM3-221ENST00000513769 IL23AQ9NPF7 189 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 METTL5Q9NRN9 209 aaKnown RBP10.33□□□□□ -0.76
TPM3-221ENST00000513769 CHST7Q9NS84 486 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 IL37Q9NZH6 218 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 EHD2Q9NZN4 543 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 STIM2Q9P246 746 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 DNAJB4Q9UDY4 337 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 PRKAG2Q9UGJ0 569 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 SSX2IPQ9Y2D8 614 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 TIMM13Q9Y5L4 95 aaPredicted RBP10.33□□□□□ -0.76
TPM3-221ENST00000513769 BACE2Q9Y5Z0 518 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 SZT2Q5T011 3432 aa10.33□□□□□ -0.76
TPM3-221ENST00000513769 TRIM43BA6NCK2 446 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 HHLA1C9JL84 531 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 TULP2O00295 520 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 NDC80O14777 642 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 MDM4O15151 490 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 CAPN5O15484 640 aaPredicted RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 PRPSAP2O60256 369 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 ZNF189O75820 626 aaPredicted RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 ZBED1O96006 694 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 FGBP02675 491 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 LCP1P13796 627 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 ACAT1P24752 427 aaKnown RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 MIPP30301 263 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 SSR1P43307 286 aaKnown RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 TUFMP49411 452 aaKnown RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 RGS7P49802 495 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 BCAR1P56945 870 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 TAS2R40P59535 323 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 RNASE9P60153 205 aaKnown RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 ZNF252P-AS1Q0IIN9 211 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 MTA1Q13330 715 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 KLF1Q13351 362 aaPredicted RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 PPIGQ13427 754 aaKnown RBP eCLIP10.32□□□□□ -0.768e-7■□□□□ 10.5
TPM3-221ENST00000513769 CUL1Q13616 776 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 NAA30Q147X3 362 aaPredicted RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 ERMARDQ5T6L9 678 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 ACBD5Q5T8D3 534 aaPredicted RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 FAM171A1Q5VUB5 890 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 ZNF280DQ6N043 979 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 C8orf74Q6P047 294 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 TMCO3Q6UWJ1 677 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 BNIPLQ7Z465 357 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 FAM35AQ86V20 835 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 LRRTM3Q86VH5 581 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 C7orf61Q8IZ16 206 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 ARHGAP18Q8N392 663 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 ARFGAP1Q8N6T3 406 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 KCTD6Q8NC69 237 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 LRRN4CLQ8ND94 238 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 PHOSPHO2Q8TCD6 241 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 DIS3LQ8TF46 1054 aaKnown RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 GRK7Q8WTQ7 553 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 MAGOHBQ96A72 148 aaKnown RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 TRIM43Q96BQ3 446 aaPredicted RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 VWCEQ96DN2 955 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 SLC2A13Q96QE2 648 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 TTPALQ9BTX7 342 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 MAK16Q9BXY0 300 aaKnown RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 CWH43Q9H720 699 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 GDF3Q9NR23 364 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 USTQ9Y2C2 406 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 UTP11Q9Y3A2 253 aaKnown RBP10.32□□□□□ -0.76
TPM3-221ENST00000513769 PCDHB5Q9Y5E4 795 aa10.32□□□□□ -0.76
TPM3-221ENST00000513769 CLDN5O00501 218 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 LILRB3O75022 631 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 PHF2O75151 1096 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 BEST1O76090 585 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 C1RP00736 705 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 ITGB1P05556 798 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 RHOXF2BP0C7M4 288 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 RARAP10276 462 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 BMP1P13497 986 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 ZFXP17010 805 aaPredicted RBP10.31□□□□□ -0.76
TPM3-221ENST00000513769 BDNFP23560 247 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 TKTP29401 623 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms