RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 AFF4Q9UHB7 1163 aaKnown RBP6.3□□□□□ -1.4
GYPB-215ENST00000513677 TPCN1Q9ULQ1 816 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 YIPF1Q9Y548 306 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 USP24Q9UPU5 2620 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 CACNA1GO43497 2377 aa6.3□□□□□ -1.4
GYPB-215ENST00000513677 GREB1Q4ZG55 1949 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 CITO14578 2027 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 SYN3O14994 580 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 CHADO15335 359 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 PFKFB2O60825 505 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 RPP40O75818 363 aaKnown RBP6.29□□□□□ -1.4
GYPB-215ENST00000513677 C1QTNF9P0C862 333 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 XRCC6P12956 609 aaKnown RBP eCLIP6.29□□□□□ -1.4
GYPB-215ENST00000513677 CNR2P34972 360 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 CCT6AP40227 531 aaKnown RBP6.29□□□□□ -1.4
GYPB-215ENST00000513677 ALDH1A3P47895 512 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 EFNA5P52803 228 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 EPHB3P54753 998 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 CYP4F8P98187 520 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 YWHAHQ04917 246 aaPredicted RBP6.29□□□□□ -1.4
GYPB-215ENST00000513677 DUSP4Q13115 394 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 ZRSR1Q15695 479 aaKnown RBP6.29□□□□□ -1.4
GYPB-215ENST00000513677 STPG1Q5TH74 334 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 TPGS2Q68CL5 300 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 TCEAL6Q6IPX3 200 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 PKN3Q6P5Z2 889 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 DSTYKQ6XUX3 929 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 RTL10Q7L3V2 364 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 CACNA2D4Q7Z3S7 1137 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 CDH24Q86UP0 819 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 WDR5BQ86VZ2 330 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 ARID3BQ8IVW6 561 aaPredicted RBP6.29□□□□□ -1.4
GYPB-215ENST00000513677 TTC9BQ8N6N2 239 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 APPL2Q8NEU8 664 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 TCEAL3Q969E4 200 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 NKD1Q969G9 470 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 ZBTB45Q96K62 511 aaPredicted RBP6.29□□□□□ -1.4
GYPB-215ENST00000513677 ACAP3Q96P50 834 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 MTMR9Q96QG7 549 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 ACO2Q99798 780 aaKnown RBP6.29□□□□□ -1.4
GYPB-215ENST00000513677 MRPL4Q9BYD3 311 aaKnown RBP6.29□□□□□ -1.4
GYPB-215ENST00000513677 BHMT2Q9H2M3 363 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 C8orf33Q9H7E9 229 aaPredicted RBP6.29□□□□□ -1.4
GYPB-215ENST00000513677 CCDC39Q9UFE4 941 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 SLC8A2Q9UPR5 921 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 MAPK8IP1Q9UQF2 711 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 TNFSF13BQ9Y275 285 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 INVSQ9Y283 1065 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 PCDHB14Q9Y5E9 798 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 ZFHX4Q86UP3 3567 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 ATG2BQ96BY7 2078 aa6.29□□□□□ -1.4
GYPB-215ENST00000513677 PHLPP2Q6ZVD8 1323 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 ARNTLO00327 626 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 SLC16A4O15374 487 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 JAK2O60674 1132 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 DNAJA2O60884 412 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 LARGE1O95461 756 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 PRAMEF12O95522 483 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 WNT11O96014 354 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 PRNPP04156 253 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 OR52Z1P0C646 297 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 FDPSP14324 419 aaKnown RBP6.28□□□□□ -1.4
GYPB-215ENST00000513677 U2AF2P26368 475 aaKnown RBP eCLIP6.28□□□□□ -1.4
GYPB-215ENST00000513677 RPA1P27694 616 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 GABRR2P28476 465 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 PMLP29590 882 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 GBP1P32455 592 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 MPLP40238 635 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 NPTX2P47972 431 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 NOVA1P51513 510 aaKnown RBP6.28□□□□□ -1.4
GYPB-215ENST00000513677 GUCY2FP51841 1108 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 CREB5Q02930 508 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 RAD51AP2Q09MP3 1159 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 PLD1Q13393 1074 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 GNL2Q13823 731 aaKnown RBP6.28□□□□□ -1.4
GYPB-215ENST00000513677 TAF12Q16514 161 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 IFI16Q16666 785 aaKnown RBP6.28□□□□□ -1.4
GYPB-215ENST00000513677 ARHGAP29Q52LW3 1261 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 ARHGAP15Q53QZ3 475 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 DGKKQ5KSL6 1271 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 SFRP5Q5T4F7 317 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 XP32Q5T750 250 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 MPZL3Q6UWV2 235 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 GK5Q6ZS86 529 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 USP37Q86T82 979 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 TTC30AQ86WT1 665 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 RALGPS2Q86X27 583 aaPredicted RBP6.28□□□□□ -1.4
GYPB-215ENST00000513677 NT5DC4Q86YG4 428 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 TMC8Q8IU68 726 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 LEMD2Q8NC56 503 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 GAB3Q8WWW8 586 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 KIFAP3Q92845 792 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 E2F7Q96AV8 911 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 GCNAQ96QF7 691 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 TMEM209Q96SK2 561 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 SEPT5Q99719 369 aaPredicted RBP6.28□□□□□ -1.4
GYPB-215ENST00000513677 POLR3CQ9BUI4 534 aaPredicted RBP6.28□□□□□ -1.4
GYPB-215ENST00000513677 EDEM2Q9BV94 578 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 TM6SF1Q9BZW5 370 aa6.28□□□□□ -1.4
GYPB-215ENST00000513677 GPR88Q9GZN0 384 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms