RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 PRPF6O94906 941 aaKnown RBP13.33□□□□□ -0.28
DDX41-215ENST00000512431 DKK1O94907 266 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 IRF1P10914 325 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 TYRP14679 529 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 PTPN1P18031 435 aaKnown RBP13.33□□□□□ -0.28
DDX41-215ENST00000512431 DDIT3P35638 169 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 DGKGP49619 791 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 ZNF132P52740 706 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 GOLGA8FQ08AF8 430 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 GOLGA8DPQ0D2H9 430 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 CAMK2BQ13554 666 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 SURF1Q15526 300 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 DUOXA2Q1HG44 320 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 CCDC157Q569K6 752 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 L1TD1Q5T7N2 865 aaKnown RBP13.33□□□□□ -0.28
DDX41-215ENST00000512431 SCARA3Q6AZY7 606 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 DBX2Q6ZNG2 339 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 DYMQ7RTS9 669 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 LIMS2Q7Z4I7 341 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 BAHD1Q8TBE0 780 aaPredicted RBP13.33□□□□□ -0.28
DDX41-215ENST00000512431 CD248Q9HCU0 757 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 CD93Q9NPY3 652 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 ITM2CQ9NQX7 267 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.33□□□□□ -0.288e-9■■■■■ 103.2
DDX41-215ENST00000512431 INTS13Q9NVM9 706 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.33□□□□□ -0.28
DDX41-215ENST00000512431 FNDC3AQ9Y2H6 1198 aaKnown RBP13.33□□□□□ -0.28
DDX41-215ENST00000512431 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
DDX41-215ENST00000512431 FAM149AA5PLN7 773 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 METTL12A8MUP2 240 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 PRRT4C9JH25 899 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 RRP8O43159 456 aaKnown RBP13.32□□□□□ -0.28
DDX41-215ENST00000512431 CACNG3O60359 315 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 GCNT3O95395 438 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 ACADMP11310 421 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 GRK6P43250 576 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 TUBP50607 506 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 MARCH9Q86YJ5 346 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 ZSWIM2Q8NEG5 633 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 FAM84AQ96KN4 292 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 ZFRQ96KR1 1074 aaKnown RBP13.32□□□□□ -0.28
DDX41-215ENST00000512431 NUP58Q9BVL2 599 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 PCIF1Q9H4Z3 704 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 CCSER2Q9H7U1 834 aa13.32□□□□□ -0.28
DDX41-215ENST00000512431 LSM7Q9UK45 103 aaKnown RBP13.32□□□□□ -0.28
DDX41-215ENST00000512431 ASH1LQ9NR48 2969 aaKnown RBP13.31□□□□□ -0.28
DDX41-215ENST00000512431 CAPN8A6NHC0 703 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 WASH3PC4AMC7 463 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 NPC1O15118 1278 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 SYNCRIPO60506 623 aaKnown RBP13.31□□□□□ -0.28
DDX41-215ENST00000512431 PPP1R37O75864 691 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 FAM163BP0C2L3 166 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 PLA2G2AP14555 144 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 GAP43P17677 238 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 LONP1P36776 959 aaKnown RBP13.31□□□□□ -0.28
DDX41-215ENST00000512431 AFF3P51826 1226 aaKnown RBP13.31□□□□□ -0.28
DDX41-215ENST00000512431 CACNA2D1P54289 1103 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 TNNC1P63316 161 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 KCNA1Q09470 495 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 E2F5Q15329 346 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 TEAD4Q15561 434 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 SMAD1Q15797 465 aaKnown RBP13.31□□□□□ -0.28
DDX41-215ENST00000512431 FUT11Q495W5 492 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 SNX30Q5VWJ9 437 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 TPGS1Q6ZTW0 290 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 HTR3DQ70Z44 454 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 GPD1LQ8N335 351 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 PRCCQ92733 491 aaPredicted RBP13.31□□□□□ -0.28
DDX41-215ENST00000512431 NXPE2Q96DL1 559 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 SIPA1Q96FS4 1042 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 STRA6Q9BX79 667 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 ZNF518BQ9C0D4 1074 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 TBC1D7Q9P0N9 293 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 USP36Q9P275 1121 aaKnown RBP13.31□□□□□ -0.28
DDX41-215ENST00000512431 EIF2B4Q9UI10 523 aaKnown RBP13.31□□□□□ -0.28
DDX41-215ENST00000512431 RAI2Q9Y5P3 530 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 STON1Q9Y6Q2 735 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 ATP8B3O60423 1300 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 PTPRBP23467 1997 aa13.31□□□□□ -0.28
DDX41-215ENST00000512431 A0A1B0GVT2 93 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 ZNF233A6NK53 670 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 A8MXQ7 604 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 H3BQV1 296 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 CLDN5O00501 218 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 KIAA0391O15091 583 aaKnown RBP13.3□□□□□ -0.28
DDX41-215ENST00000512431 TACC1O75410 805 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 C1QL1O75973 258 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 CSNK1EP49674 416 aaKnown RBP13.3□□□□□ -0.28
DDX41-215ENST00000512431 ALCAMQ13740 583 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 INAVAQ3KP66 663 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 C6orf118Q5T5N4 469 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 DHRS13Q6UX07 377 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 TMPRSS12Q86WS5 348 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 OR5B17Q8NGF7 314 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 SNX19Q92543 992 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 MRPL45Q9BRJ2 306 aaKnown RBP13.3□□□□□ -0.28
DDX41-215ENST00000512431 CBWD1Q9BRT8 395 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 MED10Q9BTT4 135 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 COMMD8Q9NX08 183 aa13.3□□□□□ -0.28
DDX41-215ENST00000512431 MARK1Q9P0L2 795 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms