RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 NT5DC1Q5TFE4 455 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 PAPD7Q5XG87 772 aaKnown RBP9.35□□□□□ -0.91
NEK1-207ENST00000511633 CXCL17Q6UXB2 119 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 ARID3BQ8IVW6 561 aaPredicted RBP9.35□□□□□ -0.91
NEK1-207ENST00000511633 GLIS3Q8NEA6 775 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 FAM129AQ9BZQ8 928 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 MROH7Q68CQ1 1323 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 FKBP9O95302 570 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 ATP6V1E1P36543 226 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 DDX39BQ13838 428 aaKnown RBP9.35□□□□□ -0.91
NEK1-207ENST00000511633 TTLL9Q3SXZ7 439 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 DNAL1Q4LDG9 190 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 FKBP9P1Q75LS8 142 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 KIRREL3Q8IZU9 778 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 KIF2BQ8N4N8 673 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 ANKRD7Q92527 254 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 ABTB1Q969K4 478 aaPredicted RBP9.35□□□□□ -0.91
NEK1-207ENST00000511633 FAM162AQ96A26 154 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 MTMR8Q96EF0 704 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 ADAM2Q99965 735 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 UBXN6Q9BZV1 441 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 PORCNQ9H237 461 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 LRRC40Q9H9A6 602 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 HPS4Q9NQG7 708 aa9.35□□□□□ -0.91
NEK1-207ENST00000511633 B2RBV5 119 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 PSMD10O75832 226 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 ARIH2O95376 493 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 SERPINB8P50452 374 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 CASP5P51878 434 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 TBX4P57082 545 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 TRPM8Q7Z2W7 1104 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 STRA8Q7Z7C7 330 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 ITIH5Q86UX2 942 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 VSIG10LQ86VR7 867 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 CNPY4Q8N129 248 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 PCYOX1LQ8NBM8 494 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 OSBPL1AQ9BXW6 950 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 KCNMB3Q9NPA1 279 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 KLC4Q9NSK0 619 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 V9GYQ6 96 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 RECQL4O94761 1208 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 CALCAP01258 141 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 GCNT1Q02742 428 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 AARS2Q5JTZ9 985 aaKnown RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 DENND1BQ6P3S1 775 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 C1orf186Q6ZWK4 172 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 PRUNE1Q86TP1 453 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 ACTL9Q8TC94 416 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 HAS1Q92839 578 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 IL17RAQ96F46 866 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 DACH2Q96NX9 599 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 SRPK1Q96SB4 655 aaKnown RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 GAD1Q99259 594 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 MRIQ9BWK5 157 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 UBE2OQ9C0C9 1292 aaKnown RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 CDC42EP4Q9H3Q1 356 aaKnown RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 CYP4F12Q9HCS2 524 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 NFASCO94856 1347 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 MYPNQ86TC9 1320 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 VPS26AO75436 327 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 TRIM16O95361 564 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 PGK1P00558 417 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 EPB42P16452 691 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 PRLRP16471 622 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 TMED1Q13445 227 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 CCNG2Q16589 344 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 ZC3H12BQ5HYM0 836 aaKnown RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 RPAINQ86UA6 219 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 CEP70Q8NHQ1 597 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 CMTM5Q96DZ9 223 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 SENP6Q9GZR1 1112 aaPredicted RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 PIH1D1Q9NWS0 290 aaKnown RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 TMEM161AQ9NX61 479 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 PSD3Q9NYI0 1048 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 SYNPO2Q9UMS6 1093 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 GLRA3O75311 464 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 MLH1P40692 756 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 YWHAZP63104 245 aaKnown RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 CYTH1Q15438 398 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 HIST2H2ACQ16777 129 aaPredicted RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 HIST2H2AA3Q6FI13 130 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 PTAR1Q7Z6K3 402 aaPredicted RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 FBXO25Q8TCJ0 367 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 PAFAH2Q99487 392 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 ADNPQ9H2P0 1102 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 FBXO44Q9H4M3 255 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 RBM22Q9NW64 420 aaKnown RBP eCLIP9.34□□□□□ -0.91
NEK1-207ENST00000511633 SPASTQ9UBP0 616 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 SFMBT1Q9UHJ3 866 aa9.34□□□□□ -0.91
NEK1-207ENST00000511633 FAM32AQ9Y421 112 aaKnown RBP9.34□□□□□ -0.91
NEK1-207ENST00000511633 PJA2O43164 708 aa9.33□□□□□ -0.92
NEK1-207ENST00000511633 AMHP03971 560 aa9.33□□□□□ -0.92
NEK1-207ENST00000511633 USP17L7P0C7H9 530 aa9.33□□□□□ -0.92
NEK1-207ENST00000511633 TPH1P17752 444 aa9.33□□□□□ -0.92
NEK1-207ENST00000511633 GLRA2P23416 452 aa9.33□□□□□ -0.92
NEK1-207ENST00000511633 BDNFP23560 247 aa9.33□□□□□ -0.92
NEK1-207ENST00000511633 KPNA1P52294 538 aaPredicted RBP9.33□□□□□ -0.92
NEK1-207ENST00000511633 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
NEK1-207ENST00000511633 ZSWIM2Q8NEG5 633 aa9.33□□□□□ -0.92
NEK1-207ENST00000511633 LPCAT1Q8NF37 534 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms