RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 MPLP40238 635 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 GRIA3P42263 894 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 SEC24CP53992 1094 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 EIF4A1P60842 406 aaKnown RBP3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 E2F1Q01094 437 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 FOXI1Q12951 378 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 BFSP2Q13515 415 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 PRKG1Q13976 671 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 LAIR1Q6GTX8 287 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 SULT6B1Q6IMI4 303 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 RINT1Q6NUQ1 792 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 TLDC1Q6P9B6 456 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 PARS2Q7L3T8 475 aaKnown RBP3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 ZNF354CQ86Y25 554 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 CPXCR1Q8N123 301 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 SIRT6Q8N6T7 355 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 NGDNQ8NEJ9 315 aaKnown RBP3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 MYRIPQ8NFW9 859 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 SUN3Q8TAQ9 357 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 LINC00476Q8WZB0 136 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 VPS50Q96JG6 964 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 PRR25Q96S07 402 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 TTPALQ9BTX7 342 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 AGO4Q9HCK5 861 aaKnown RBP3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 TMEM8AQ9HCN3 771 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 SYBUQ9NX95 663 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 SH2B3Q9UQQ2 575 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 DTNAQ9Y4J8 743 aa3.96□□□□□ -1.78
TRAPPC11-207ENST00000511409 SALL3Q9BXA9 1300 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 COL4A3Q01955 1670 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 PCDH17O14917 1159 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 NPHP1O15259 732 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 DNPH1O43598 174 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 CREB3O43889 395 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 PMPCBO75439 489 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 ITGA2BP08514 1039 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 ITGA5P08648 1049 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 KLRK1P26718 216 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 ADRA1BP35368 520 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 PBX1P40424 430 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 GSTM5P46439 218 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 DPTQ07507 201 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 BIRC3Q13489 604 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 CLCA4Q14CN2 919 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 CYP1B1Q16678 543 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 ST3GAL2Q16842 350 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 TBC1D25Q3MII6 688 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 FAM153CQ494X1 144 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 TMEM196Q5HYL7 178 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 L1TD1Q5T7N2 865 aaKnown RBP3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 ATPAF1Q5TC12 328 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 KIAA0895LQ68EN5 471 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 Q6ZWC4 215 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 ZNF627Q7L945 461 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 ULK2Q8IYT8 1036 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 NRSN1Q8IZ57 195 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 NKAPQ8N5F7 415 aaKnown RBP3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 TRAPPC12Q8WVT3 735 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 RSPRY1Q96DX4 576 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 KATNAL1Q9BW62 490 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 BRD8Q9H0E9 1235 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 MGAT4CQ9UBM8 478 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 LPAR3Q9UBY5 353 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 HERC5Q9UII4 1024 aaKnown RBP3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 PCDHGB3Q9Y5G1 929 aa3.95□□□□□ -1.78
TRAPPC11-207ENST00000511409 COL15A1P39059 1388 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 GRID2IPA4D2P6 1211 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 HMX3A6NHT5 357 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 KIAA0355O15063 1070 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 CA12O43570 354 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 SPRY2O43597 315 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 TAF5LO75529 589 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 ACTL6BO94805 426 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 NTSR2O95665 410 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 ANXA6P08133 673 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 NPSP0C0P6 89 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 FAM163BP0C2L3 166 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 JUPP14923 745 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 CTGFP29279 349 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 CXCR5P32302 372 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 HTR7P34969 479 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 CCT8P50990 548 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 POLE2P56282 527 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 EEFSECP57772 596 aaKnown RBP3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 KLF10Q13118 480 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 FHL3Q13643 280 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 RAPGEF1Q13905 1077 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 CSHL1Q14406 222 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 GRM4Q14833 912 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 POSTNQ15063 836 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 ACOX1Q15067 660 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 ERCC6LQ2NKX8 1250 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 PCID2Q5JVF3 399 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 DENND2CQ68D51 928 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 KRT27Q7Z3Y8 459 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 WDR53Q7Z5U6 358 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 RASAL3Q86YV0 1011 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 ABHD11Q8NFV4 315 aa3.94□□□□□ -1.78
TRAPPC11-207ENST00000511409 RP9Q8TA86 221 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms