RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 RXRAP19793 462 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 SF3A3Q12874 501 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 KCNJ12Q14500 433 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 CD300EQ496F6 205 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 PREPLQ4J6C6 727 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 NEK10Q6ZWH5 1172 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 ADAMTS18Q8TE60 1221 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 GOLGA1Q92805 767 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 KTI12Q96EK9 354 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 C7orf26Q96N11 449 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 C17orf80Q9BSJ5 609 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 TMX4Q9H1E5 349 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 GALNT9Q9HCQ5 603 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 PREBQ9HCU5 417 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 LIN7CQ9NUP9 197 aaKnown RBP6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 TRPM5Q9NZQ8 1165 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 DKK2Q9UBU2 259 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 NRBP1Q9UHY1 535 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 SERTAD3Q9UJW9 196 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 DNAJC16Q9Y2G8 782 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 AFG3L2Q9Y4W6 797 aa6.16□□□□□ -1.42
HMGB1P47-201ENST00000511281 KIAA0355O15063 1070 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 CYP21A2P08686 494 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 ATP1A3P13637 1013 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 MAGEA10P43363 369 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 DCTN1Q14203 1278 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 KCTD2Q14681 263 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 RPS6KA2Q15349 733 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 PKN1Q16512 942 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 BAK1Q16611 211 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 ST3GAL2Q16842 350 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 GEN1Q17RS7 908 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 ATG16L1Q676U5 607 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 ANO7Q6IWH7 933 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 CLEC9AQ6UXN8 241 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 C4orf50Q6ZRC1 276 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 C1QL4Q86Z23 238 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 FSTL5Q8N475 847 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 Q8TCH9 128 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 ATRIPQ8WXE1 791 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 SOCS4Q8WXH5 440 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 ST8SIA4Q92187 359 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 TMEM125Q96AQ2 219 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 HVCN1Q96D96 273 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 RRP36Q96EU6 259 aaKnown RBP6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 HAPLN3Q96S86 360 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 TREX2Q9BQ50 279 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 BRD8Q9H0E9 1235 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 SERHL2Q9H4I8 314 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 CHODLQ9H9P2 273 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 TBX20Q9UMR3 447 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 SORCS3Q9UPU3 1222 aa6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 DRG1Q9Y295 367 aaKnown RBP6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 RRP7AQ9Y3A4 280 aaKnown RBP6.15□□□□□ -1.42
HMGB1P47-201ENST00000511281 VWA3AA6NCI4 1184 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 KIF28PB7ZC32 967 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 RNASET2O00584 256 aaKnown RBP6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 TIMM44O43615 452 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 ACO1P21399 889 aaKnown RBP6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 GATA3P23771 443 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 BMPR1AP36894 532 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 DGKQP52824 942 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 DCAF7P61962 342 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 PRKG2Q13237 762 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 PDE1CQ14123 709 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 RRP1BQ14684 758 aaKnown RBP6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 BEAN1Q3B7T3 259 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 AASDHQ4L235 1098 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 TMEM196Q5HYL7 178 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 WDR45BQ5MNZ6 344 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 L1TD1Q5T7N2 865 aaKnown RBP6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 DEPDC1Q5TB30 811 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 SPATA1Q5VX52 437 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 SLC9A4Q6AI14 798 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 RAB11FIP4Q86YS3 637 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 METTL25Q8N6Q8 603 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 HMGB4Q8WW32 186 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 FMNL2Q96PY5 1086 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 MECRQ9BV79 373 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 PRDM13Q9H4Q3 707 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 NRDE2Q9H7Z3 1164 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 AURKAIP1Q9NWT8 199 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 NKX1-2Q9UD57 310 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 KCND3Q9UK17 655 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 SH2B3Q9UQQ2 575 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 UBE2J1Q9Y385 318 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 RNF114Q9Y508 228 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZNF536O15090 1300 aa6.14□□□□□ -1.43
HMGB1P47-201ENST00000511281 MBD3L5A6NJ08 208 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 EXOC5O00471 708 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 PROM1O43490 865 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 LMNAP02545 664 aaKnown RBP6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZSCAN22P10073 491 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 PSMC2P35998 433 aaKnown RBP6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 PBX1P40424 430 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 MTHFSP49914 203 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 EIF4A1P60842 406 aaKnown RBP6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 TOB2Q14106 344 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 SPDYE7PQ495Y7 208 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms