RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SLC4A5Q9BY07 1137 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 GEMIN8Q9NWZ8 242 aaKnown RBP18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 SNX9Q9Y5X1 595 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 TRDMT1O14717 391 aaKnown RBP18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 APRTP07741 180 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 DHRS4L1P0CG22 281 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 DCAF4L1Q3SXM0 396 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 TAPT1Q6NXT6 567 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 APBB1IPQ7Z5R6 666 aaPredicted RBP18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 TTC30AQ86WT1 665 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 ZDHHC17Q8IUH5 632 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 CDKL3Q8IVW4 592 aaPredicted RBP18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 SCUBE3Q8IX30 993 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 PPM1NQ8N819 430 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 NSMCE1Q8WV22 266 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 VTA1Q9NP79 307 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 FAM49BQ9NUQ9 324 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 SRCAPQ6ZRS2 3230 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 A0A0G2JND7 137 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 COPEO14579 308 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 CBX6O95503 412 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 RPSAP08865 295 aaKnown RBP18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 ETV4P43268 484 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 GCLCP48506 637 aaPredicted RBP18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 PKDCCQ504Y2 493 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 PLEKHG4Q58EX7 1191 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 PPP6R3Q5H9R7 873 aaPredicted RBP18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 CLNKQ7Z7G1 428 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 RFWD2Q8NHY2 731 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 SLC7A6OSQ96CW6 309 aaPredicted RBP18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 LRRC39Q96DD0 335 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 MRPL45Q9BRJ2 306 aaKnown RBP18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 TUBB6Q9BUF5 446 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 DERAQ9Y315 318 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 TTLL3Q9Y4R7 772 aa18.63■□□□□ 0.57
CCHCR1-228ENST00000509552 ZNF487B1APH4 448 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 TRAFD1O14545 582 aaPredicted RBP18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 TGDSO95455 350 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 SNRPAP09012 282 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 ARFIP2P53365 341 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 CA9Q16790 459 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 FAXCQ5TGI0 409 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 TLDC1Q6P9B6 456 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 SH2D5Q6ZV89 423 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 PRPF39Q86UA1 669 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 LONP2Q86WA8 852 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 SLC35F5Q8WV83 523 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 PTPRN2Q92932 1015 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 TBC1D10AQ9BXI6 508 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 PLEKHA5Q9HAU0 1116 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 ZNF180Q9UJW8 692 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 A6NJR5 290 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 TRIM49D1C9J1S8 452 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 H3BRB1 525 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 GSTA2P09210 222 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 ZFXP17010 805 aaPredicted RBP18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 PTPN4P29074 926 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 MAGEA6P43360 314 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 ZNF410Q86VK4 478 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 STK32AQ8WU08 396 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 APBB2Q92870 758 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 CDCA5Q96FF9 252 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 CXorf56Q9H5V9 222 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 TUT1Q9H6E5 874 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 POPDC2Q9HBU9 364 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 LNPEPQ9UIQ6 1025 aa18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 MTO1Q9Y2Z2 717 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-228ENST00000509552 PAPSS1O43252 624 aaPredicted RBP18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 MAP3K6O95382 1288 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 NPTXRO95502 500 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 PRKD1Q15139 912 aaPredicted RBP18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 CAND1Q86VP6 1230 aaKnown RBP18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 VPS52Q8N1B4 723 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 PLCD3Q8N3E9 789 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 MCUQ8NE86 351 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 CCDC110Q8TBZ0 833 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 KHSRPQ92945 711 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 EMID1Q96A84 441 aaPredicted RBP18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 C16orf70Q9BSU1 422 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 NRDE2Q9H7Z3 1164 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 DICER1Q9UPY3 1922 aaKnown RBP18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 CITO14578 2027 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 TOMM70O94826 608 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 PRKCHP24723 683 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 CYP2F1P24903 491 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 HDAC4P56524 1084 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 R3HDM1Q15032 1099 aaKnown RBP18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 OR6B3Q8NGW1 331 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 SRPK1Q96SB4 655 aaKnown RBP18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 HEY2Q9UBP5 337 aa18.61■□□□□ 0.57
CCHCR1-228ENST00000509552 DIAPH2O60879 1101 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 HAUS5O94927 633 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 BGNP21810 368 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 SERPINB4P48594 390 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 CCNA1P78396 465 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 ZBTB16Q05516 673 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 GRIK4Q16099 956 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 ZNF792Q3KQV3 632 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 MAMDC4Q6UXC1 1216 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 UNC93AQ86WB7 457 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms