RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 H2AFY2Q9P0M6 372 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 IFNKQ9P0W0 207 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 MED16Q9Y2X0 877 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SF3B6Q9Y3B4 125 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 CCDC171Q6TFL3 1326 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 GSTTP1A0A1W2PQM5 241 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TMEM110-MUSTN1A8MSY1 372 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 MEIS2O14770 477 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 XPO1O14980 1071 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PHGDHO43175 533 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 GAS2O43903 313 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PCCBP05166 539 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 GLULP15104 373 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CD19P15391 556 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 MYBPC3Q14896 1274 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 C15orf59Q2T9L4 293 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 NHSL2Q5HYW2 709 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 EPHA10Q5JZY3 1008 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ATAD3BQ5T9A4 648 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TLDC1Q6P9B6 456 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 FAM83HQ6ZRV2 1179 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 GALNT12Q8IXK2 581 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 NRSN1Q8IZ57 195 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SHCBP1Q8NEM2 672 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 STARD8Q92502 1023 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SNX25Q9H3E2 840 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SEC31BQ9NQW1 1179 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PCDHB16Q9NRJ7 776 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TRAF3IP3Q9Y228 551 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 NCF1BA6NI72 391 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 NCF1CA8MVU1 366 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 METTL18O95568 372 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 MMP2P08253 660 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PDGFRAP16234 1089 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PORP16435 677 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TPH1P17752 444 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 FGFR2P21802 821 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 USP11P51784 963 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 RBP5P82980 135 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 HTRA3P83110 453 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TLE2Q04725 743 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SPIRE1Q08AE8 756 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 RAB3GAP1Q15042 981 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 KRT31Q15323 416 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SNCBQ16143 134 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SARM1Q6SZW1 724 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CHST3Q7LGC8 479 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ADGRG6Q86SQ4 1221 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 RTN4RL1Q86UN2 441 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PLCZ1Q86YW0 608 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 RFX6Q8HWS3 928 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 MYOCDQ8IZQ8 938 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 KBTBD3Q8NAB2 608 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF511Q8NB15 262 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 FLAD1Q8NFF5 587 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 OSBP2Q969R2 916 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 GFM2Q969S9 779 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PLD4Q96BZ4 506 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ZC3H10Q96K80 434 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CMTM3Q96MX0 182 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CLUHP3Q96NS8 147 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CNPY3Q9BT09 278 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 MENTQ9BUN1 341 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ANKRD2Q9GZV1 360 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 RNF32Q9H0A6 362 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 AP5M1Q9H0R1 490 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 RAB17Q9H0T7 212 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 DDX18Q9NVP1 670 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 FNIP2Q9P278 1114 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SNCAIPQ9Y6H5 919 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 UBN2Q6ZU65 1347 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SMCO3A2RU48 225 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF839A8K0R7 811 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TMEM229AB2RXF0 380 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 J3QW42 95 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 NDUFS8O00217 210 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 KIAA0391O15091 583 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ASNA1O43681 348 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PROCP04070 461 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CYP2E1P05181 493 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 DDX5P17844 614 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 KRT4P19013 534 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 KELP23276 732 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 HOXC13P31276 330 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 STIP1P31948 543 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ETV5P41161 510 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 HSPA7P48741 367 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PSMD7P51665 324 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PDE1BQ01064 536 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 FGL1Q08830 312 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SMAD4Q13485 552 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 GBX1Q14549 363 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 MCMDC2Q4G0Z9 681 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 LRRC73Q5JTD7 316 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SNX30Q5VWJ9 437 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 DENND5AQ6IQ26 1287 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 KRT74Q7RTS7 529 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 DYMQ7RTS9 669 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 FAM129CQ86XR2 697 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SLITRK4Q8IW52 837 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms