RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 RBM15BQ8NDT2 890 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 PHOSPHO2Q8TCD6 241 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 U2AF1L4Q8WU68 220 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 TGFBRAP1Q8WUH2 860 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 THAP11Q96EK4 314 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 NSL1Q96IY1 281 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 FMO2Q99518 471 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 NOC4LQ9BVI4 516 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 ZMYND12Q9H0C1 365 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 NT5C3AQ9H0P0 336 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 AZI2Q9H6S1 392 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 SP110Q9HB58 689 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 UCKL1Q9NWZ5 548 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 ZFP69BQ9UJL9 534 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 APPL1Q9UKG1 709 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 RIPK3Q9Y572 518 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 SLC12A7Q9Y666 1083 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 ZHX2Q9Y6X8 837 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 PARP4Q9UKK3 1724 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 CAPN8A6NHC0 703 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 C16orf96A6NNT2 1141 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 RASGRF2O14827 1237 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 SNAP91O60641 907 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 CIB2O75838 187 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 CTDNEP1O95476 244 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 FAM58BPP0C7Q3 252 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 GFAPP14136 432 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 RFC1P35251 1148 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 BMXP51813 675 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 MYBPC1Q00872 1141 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 TRPC3Q13507 836 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 AUHQ13825 339 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 ZNF792Q3KQV3 632 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 GRTP1Q5TC63 336 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 OGFRL1Q5TC84 451 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 FBXL19Q6PCT2 694 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 ABRAXAS1Q6UWZ7 409 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 NUDT18Q6ZVK8 323 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 GPBP1Q86WP2 473 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 TBC1D21Q8IYX1 336 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 IFNL3Q8IZI9 196 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 HM13Q8TCT9 377 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 RBM18Q96H35 190 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 ART5Q96L15 291 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 RUNDC3BQ96NL0 473 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 TMEM79Q9BSE2 394 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 ISCA1Q9BUE6 129 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 ZC3H12CQ9C0D7 883 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 C6orf62Q9GZU0 229 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 SLC6A17Q9H1V8 727 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 TRIT1Q9H3H1 467 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 KCNK13Q9HB14 408 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 NPAP1Q9NZP6 1156 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 TCEAL9Q9UHQ7 104 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 CPSF3Q9UKF6 684 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 KCNH3Q9ULD8 1083 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 NEU2Q9Y3R4 380 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 TESMINQ9Y4I5 508 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 EMSYQ7Z589 1322 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 ADGRA3Q8IWK6 1321 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 PXDNLA1KZ92 1463 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 ARHGAP23Q9P227 1491 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 MROH1Q8NDA8 1641 aa11.18□□□□□ -0.62
PDLIM5-210ENST00000508216 FRMPD1Q5SYB0 1578 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 RTL9Q8NET4 1388 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 TMEM120BA0PK00 339 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 C3orf80F5H4A9 247 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 STX16-NPEPL1H3BU86 382 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 ZBTB39O15060 712 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 RANBP6O60518 1105 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 TSC22D2O75157 780 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 PTP4A3O75365 173 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 GCATO75600 419 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 TCEA3O75764 348 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 CBX6O95503 412 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 VAMP1P23763 118 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 POLR2BP30876 1174 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 CAP2P40123 477 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 ST13P50502 369 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 NCKAP1LP55160 1127 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 CDK10Q15131 360 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 PTPAQ15257 358 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 LRIT3Q3SXY7 679 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 ZBED5Q49AG3 693 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 PPM1LQ5SGD2 360 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 PRR23BQ6ZRT6 265 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 IKBIPQ70UQ0 350 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 DIS3L2Q8IYB7 885 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 TRMT44Q8IYL2 757 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 EPS8L1Q8TE68 723 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 DHX38Q92620 1227 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 FOXJ1Q92949 421 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 FATE1Q969F0 183 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 LRRC59Q96AG4 307 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 OMA1Q96E52 524 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 PDXPQ96GD0 296 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 PAGE5Q96GU1 130 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 AK8Q96MA6 479 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms