RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CMASQ8NFW8 434 aaPredicted RBP14.86□□□□□ -0.03
RNF4-208ENST00000507247 OVCA2Q8WZ82 227 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 SLITRK1Q96PX8 696 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 SLC2A13Q96QE2 648 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 APOL5Q9BWW9 433 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 TSGA10Q9BZW7 698 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 MRPL47Q9HD33 250 aaKnown RBP14.86□□□□□ -0.03
RNF4-208ENST00000507247 EHD2Q9NZN4 543 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 CLEC1BQ9P126 229 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 UVRAGQ9P2Y5 699 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 UXTQ9UBK9 157 aaPredicted RBP14.86□□□□□ -0.03
RNF4-208ENST00000507247 GUCA1BQ9UMX6 200 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 TRANK1O15050 2925 aa14.86□□□□□ -0.03
RNF4-208ENST00000507247 MACROD2A1Z1Q3 448 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 C2CD4BA6NLJ0 364 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 ZSCAN12O43309 604 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 KRT86O43790 486 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 MOCS3O95396 460 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 RHOP08100 348 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 MYL4P12829 197 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 PTPN2P17706 415 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 GABRR2P28476 465 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 LTBRP36941 435 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 CCR2P41597 374 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 EPHA5P54756 1037 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 HADHBP55084 474 aaKnown RBP14.85□□□□□ -0.03
RNF4-208ENST00000507247 PITX1P78337 314 aaPredicted RBP14.85□□□□□ -0.03
RNF4-208ENST00000507247 NTHL1P78549 312 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 SYPL2Q5VXT5 272 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 DCUN1D2Q6PH85 259 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 PDZD8Q8NEN9 1154 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 RXFP2Q8WXD0 754 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 SMG7Q92540 1137 aaKnown RBP14.85□□□□□ -0.03
RNF4-208ENST00000507247 EDEM1Q92611 657 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 ADAM33Q9BZ11 813 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 POPDC2Q9HBU9 364 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 ASAH2Q9NR71 780 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 TLR8Q9NR97 1041 aaKnown RBP14.85□□□□□ -0.03
RNF4-208ENST00000507247 KCND1Q9NSA2 647 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 CLDND1Q9NY35 253 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 CDH22Q9UJ99 828 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 ANAPC7Q9UJX3 599 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 NUDT5Q9UKK9 219 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 NAALADL1Q9UQQ1 740 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 PAXBP1Q9Y5B6 917 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 UNC80Q8N2C7 3258 aa14.85□□□□□ -0.03
RNF4-208ENST00000507247 DENND4AQ7Z401 1863 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 HELZP42694 1942 aaKnown RBP14.84□□□□□ -0.03
RNF4-208ENST00000507247 ZNF840PA6NDX5 716 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 MOSPD3O75425 235 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 SRGAP2BP0DMP2 458 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 NCAM1P13591 858 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 GJA1P17302 382 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 TFE3P19532 575 aaPredicted RBP14.84□□□□□ -0.03
RNF4-208ENST00000507247 GPD1P21695 349 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 NOP2P46087 812 aaKnown RBP14.84□□□□□ -0.03
RNF4-208ENST00000507247 PSEN1P49768 467 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 CYP4F8P98187 520 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 SLC5A9Q2M3M2 681 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 ARHGAP29Q52LW3 1261 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 DCAF6Q58WW2 860 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 OTUD1Q5VV17 481 aaPredicted RBP14.84□□□□□ -0.03
RNF4-208ENST00000507247 SNX30Q5VWJ9 437 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 BTBD8Q5XKL5 378 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 ARCQ7LC44 396 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 GRASPQ7Z6J2 395 aaPredicted RBP14.84□□□□□ -0.03
RNF4-208ENST00000507247 CPNE8Q86YQ8 564 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 ARHGAP18Q8N392 663 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 MAFAQ8NHW3 353 aaPredicted RBP14.84□□□□□ -0.03
RNF4-208ENST00000507247 TPCN2Q8NHX9 752 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 TCEAL4Q96EI5 215 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 CFAP57Q96MR6 1250 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 DDX23Q9BUQ8 820 aaKnown RBP14.84□□□□□ -0.03
RNF4-208ENST00000507247 ABCC13Q9NSE7 274 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.84□□□□□ -0.03
RNF4-208ENST00000507247 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.84□□□□□ -0.03
RNF4-208ENST00000507247 TRPM5Q9NZQ8 1165 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 CAPN6Q9Y6Q1 641 aa14.84□□□□□ -0.03
RNF4-208ENST00000507247 A0A1W2PRU2 124 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 DPYSL4O14531 572 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 CCP110O43303 1012 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 RARGP13631 454 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 FOSL2P15408 326 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 PDGFRAP16234 1089 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 NOS2P35228 1153 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 MATKP42679 507 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 C15orf59Q2T9L4 293 aaPredicted RBP14.83□□□□□ -0.04
RNF4-208ENST00000507247 CCDC14Q49A88 953 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 RAB6CQ53S08 254 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 PRSS36Q5K4E3 855 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 EP400NLQ6ZTU2 488 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 BEND5Q7L4P6 421 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 GPR149Q86SP6 731 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.83□□□□□ -0.04
RNF4-208ENST00000507247 SHKBP1Q8TBC3 707 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 FNIP1Q8TF40 1166 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 GOLGA1Q92805 767 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 PABPC5Q96DU9 382 aaKnown RBP14.83□□□□□ -0.04
RNF4-208ENST00000507247 NPY6RQ99463 290 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 IRX2Q9BZI1 471 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms