RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SLC16A4O15374 487 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 CLDN3O15551 220 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 TRAK2O60296 914 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 TOM1L1O75674 476 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 SFTPCP11686 197 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 PAX3P23760 479 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 ACAT1P24752 427 aaKnown RBP7.71□□□□□ -1.18
VCAN-207ENST00000507162 RBMS1P29558 406 aaKnown RBP7.71□□□□□ -1.18
VCAN-207ENST00000507162 AFMP43652 599 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 LSSP48449 732 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 INHBCP55103 352 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 E2F1Q01094 437 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 ST3GAL1Q11201 340 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 BNIP3Q12983 259 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 STRN3Q13033 797 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 ORC1Q13415 861 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 ILKQ13418 452 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 NCAPHQ15003 741 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 SKIDA1Q1XH10 827 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 ARL13BQ3SXY8 428 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 SPATA1Q5VX52 437 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 SPATA2LQ8IUW3 424 aaPredicted RBP7.71□□□□□ -1.18
VCAN-207ENST00000507162 SAP25Q8TEE9 199 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 XPO6Q96QU8 1125 aaKnown RBP7.71□□□□□ -1.18
VCAN-207ENST00000507162 ELF4Q99607 663 aaPredicted RBP7.71□□□□□ -1.18
VCAN-207ENST00000507162 ACE2Q9BYF1 805 aaPredicted RBP7.71□□□□□ -1.18
VCAN-207ENST00000507162 OSBPL2Q9H1P3 480 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 POLR1BQ9H9Y6 1135 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 TUFT1Q9NNX1 390 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 SPHK2Q9NRA0 654 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 GTF3C4Q9UKN8 822 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 SH3BP1Q9Y3L3 701 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.71□□□□□ -1.18
VCAN-207ENST00000507162 STON1Q9Y6Q2 735 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 PHLPP2Q6ZVD8 1323 aa7.71□□□□□ -1.18
VCAN-207ENST00000507162 ARID1BQ8NFD5 2236 aaPredicted RBP7.71□□□□□ -1.18
VCAN-207ENST00000507162 TMEM131Q92545 1883 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 NAV3Q8IVL0 2385 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 ZNF840PA6NDX5 716 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 SFI1A8K8P3 1242 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 NEDD8-MDP1E9PL57 170 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 PIRO00625 290 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 HOXC11O43248 304 aaPredicted RBP7.7□□□□□ -1.18
VCAN-207ENST00000507162 PAPSS1O43252 624 aaPredicted RBP7.7□□□□□ -1.18
VCAN-207ENST00000507162 DEXIO95424 95 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 GJB6O95452 261 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 IRF1P10914 325 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 ACSL1P33121 698 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 PDIA5Q14554 519 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 JADE1Q6IE81 842 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 FOXR1Q6PIV2 292 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 DDX42Q86XP3 938 aaKnown RBP eCLIP7.7□□□□□ -1.18
VCAN-207ENST00000507162 KIAA1958Q8N8K9 716 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 RFFLQ8WZ73 363 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 SKA1Q96BD8 255 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 BIRC7Q96CA5 298 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 CCDC97Q96F63 343 aaPredicted RBP7.7□□□□□ -1.18
VCAN-207ENST00000507162 CCNL2Q96S94 520 aaPredicted RBP7.7□□□□□ -1.18
VCAN-207ENST00000507162 OSGEPQ9NPF4 335 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 ASCL3Q9NQ33 180 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.7□□□□□ -1.18
VCAN-207ENST00000507162 RBM19Q9Y4C8 960 aaKnown RBP7.7□□□□□ -1.18
VCAN-207ENST00000507162 ZFHX3Q15911 3703 aa7.7□□□□□ -1.18
VCAN-207ENST00000507162 CLEC18AA5D8T8 446 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 CPLX1O14810 134 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 EFSO43281 561 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 PPFIA2O75334 1257 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 CSO75390 466 aaKnown RBP7.69□□□□□ -1.18
VCAN-207ENST00000507162 DXOO77932 396 aaKnown RBP7.69□□□□□ -1.18
VCAN-207ENST00000507162 PYGBP11216 843 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 PFKLP17858 780 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 ELAVL4P26378 380 aaKnown RBP7.69□□□□□ -1.18
VCAN-207ENST00000507162 CD27P26842 260 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 TAF6P49848 677 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 USP46P62068 366 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 FOXK1P85037 733 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 MYL7Q01449 175 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 IFRD2Q12894 506 aaPredicted RBP7.69□□□□□ -1.18
VCAN-207ENST00000507162 SHBQ15464 509 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 ENOX2Q16206 610 aaKnown RBP7.69□□□□□ -1.18
VCAN-207ENST00000507162 CCDC142Q17RM4 750 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 EARS2Q5JPH6 523 aaKnown RBP7.69□□□□□ -1.18
VCAN-207ENST00000507162 C3orf38Q5JPI3 329 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 CLEC18BQ6UXF7 455 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 TPGS1Q6ZTW0 290 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 BBS7Q8IWZ6 715 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 SRRM1Q8IYB3 904 aaKnown RBP7.69□□□□□ -1.18
VCAN-207ENST00000507162 CLEC18CQ8NCF0 446 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 BHMTQ93088 406 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 OTUB2Q96DC9 234 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 BICD1Q96G01 975 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 BBS2Q9BXC9 721 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 TRIM9Q9C026 710 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 PCED1AQ9H1Q7 454 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 EPN3Q9H201 632 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 ABCB6Q9NP58 842 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 DDX43Q9NXZ2 648 aaKnown RBP7.69□□□□□ -1.18
VCAN-207ENST00000507162 ARHGAP28Q9P2N2 729 aa7.69□□□□□ -1.18
VCAN-207ENST00000507162 FAM47DPA6NHR8 397 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 KPNA7A9QM74 516 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms