RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 ZDHHC12Q96GR4 267 aa6.82□□□□□ -1.32
CHD1-204ENST00000505982 BOD1Q96IK1 185 aa6.82□□□□□ -1.32
CHD1-204ENST00000505982 C17orf80Q9BSJ5 609 aa6.82□□□□□ -1.32
CHD1-204ENST00000505982 RIC8AQ9NPQ8 531 aa6.82□□□□□ -1.32
CHD1-204ENST00000505982 PDP2Q9P2J9 529 aa6.82□□□□□ -1.32
CHD1-204ENST00000505982 VPS51Q9UID3 782 aa6.82□□□□□ -1.32
CHD1-204ENST00000505982 FEM1BQ9UK73 627 aa6.82□□□□□ -1.32
CHD1-204ENST00000505982 CRYL1Q9Y2S2 319 aa6.82□□□□□ -1.32
CHD1-204ENST00000505982 OR2W5A6NFC9 320 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 B9A039 149 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 PPM1DO15297 605 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 CDKL5O76039 1030 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 SRGNP10124 158 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 GATA3P23771 443 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 VAV2P52735 878 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 PNLIPRP1P54315 467 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 EIF2B5Q13144 721 aaKnown RBP6.81□□□□□ -1.32
CHD1-204ENST00000505982 CSHL1Q14406 222 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 LRRTM4Q86VH4 590 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 IZUMO1Q8IYV9 350 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 C11orf44Q8N8P7 122 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 CPEB3Q8NE35 698 aaKnown RBP6.81□□□□□ -1.32
CHD1-204ENST00000505982 IL17REQ8NFR9 667 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 OR6Y1Q8NGX8 325 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 THAP4Q8WY91 577 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 NACC2Q96BF6 587 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 ZHX3Q9H4I2 956 aa6.81□□□□□ -1.32
CHD1-204ENST00000505982 UNKLQ9H9P5 680 aaKnown RBP6.81□□□□□ -1.32
CHD1-204ENST00000505982 PRRT4C9JH25 899 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 ADM5C9JUS6 153 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 H0Y3Z8 333 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 AGPSO00116 658 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 PPP6R2O75170 966 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 FAM155BO75949 473 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 CKMT1AP12532 417 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 PPP3CBP16298 524 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 XBP1P17861 261 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 RXRAP19793 462 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 DDX6P26196 483 aaKnown RBP eCLIP6.8□□□□□ -1.32
CHD1-204ENST00000505982 PTGS2P35354 604 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 DDIT3P35638 169 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 SLC25A3Q00325 362 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 COL10A1Q03692 680 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 LY6KQ17RY6 165 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 SLC9A4Q6AI14 798 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 SP5Q6BEB4 398 aaPredicted RBP6.8□□□□□ -1.32
CHD1-204ENST00000505982 ARMC6Q6NXE6 501 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 NFRKBQ6P4R8 1299 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 FAM109AQ8N4B1 249 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 CSGALNACT1Q8TDX6 532 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 RSC1A1Q92681 617 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 EIF3CQ99613 913 aaKnown RBP6.8□□□□□ -1.32
CHD1-204ENST00000505982 DDX23Q9BUQ8 820 aaKnown RBP6.8□□□□□ -1.32
CHD1-204ENST00000505982 AMBRA1Q9C0C7 1298 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 WDR26Q9H7D7 661 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 NRDE2Q9H7Z3 1164 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 GLOD4Q9HC38 313 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 IFT80Q9P2H3 777 aaPredicted RBP6.8□□□□□ -1.32
CHD1-204ENST00000505982 DAPP1Q9UN19 280 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 SLC27A6Q9Y2P4 619 aa6.8□□□□□ -1.32
CHD1-204ENST00000505982 KRT38O76015 456 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 PDHA1P08559 390 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 TIAL1Q01085 375 aaKnown RBP eCLIP6.79□□□□□ -1.32
CHD1-204ENST00000505982 SP2Q02086 613 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 DDX10Q13206 875 aaKnown RBP6.79□□□□□ -1.32
CHD1-204ENST00000505982 TOB2Q14106 344 aaPredicted RBP6.79□□□□□ -1.32
CHD1-204ENST00000505982 MAPRE1Q15691 268 aaKnown RBP6.79□□□□□ -1.32
CHD1-204ENST00000505982 FAM110CQ1W6H9 321 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 MAATS1Q7Z4T9 603 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 PPHLN1Q8NEY8 458 aaKnown RBP6.79□□□□□ -1.32
CHD1-204ENST00000505982 SLC30A5Q8TAD4 765 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 CPT1BQ92523 772 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 HAS1Q92839 578 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 PPM1MQ96MI6 270 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 COG8Q96MW5 612 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 SEC62Q99442 399 aaKnown RBP6.79□□□□□ -1.32
CHD1-204ENST00000505982 NUDT22Q9BRQ3 303 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 VN1R3Q9BXE9 311 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 FSCN3Q9NQT6 498 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 GJD2Q9UKL4 321 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 RIMKLBQ9ULI2 386 aa6.79□□□□□ -1.32
CHD1-204ENST00000505982 C19orf53Q9UNZ5 99 aaPredicted RBP6.79□□□□□ -1.32
CHD1-204ENST00000505982 DRG1Q9Y295 367 aaKnown RBP6.79□□□□□ -1.32
CHD1-204ENST00000505982 A0A1B0GVC2 190 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 UNC119BA6NIH7 251 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 MARCH11A6NNE9 402 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 EFCAB8A8MWE9 144 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 J3KRW8 73 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 PSMD9O00233 223 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 EXOC5O00471 708 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 TAF5LO75529 589 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 VNN1O95497 513 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 JUPP14923 745 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 CD19P15391 556 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 LMO1P25800 156 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 GSTM5P46439 218 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 ACTR2P61160 394 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 G3BP1Q13283 466 aaKnown RBP eCLIP6.78□□□□□ -1.32
CHD1-204ENST00000505982 SLC12A1Q13621 1099 aa6.78□□□□□ -1.32
CHD1-204ENST00000505982 BEAN1Q3B7T3 259 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms