RNA–Protein interactions for RNA: ENST00000505591.1

COL25A1-206, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 3

Gene COL25A1, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-206ENST00000505591 PHACTR2O75167 634 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 NDUFS2O75306 463 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 GNSP15586 552 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 HOXD13P35453 343 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 CYP2J2P51589 502 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 MYL6P60660 151 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 CUL4AQ13619 759 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 WDR45BQ5MNZ6 344 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 FAM26FQ5R3K3 315 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 CNNM4Q6P4Q7 775 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 HTR3DQ70Z44 454 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 RAB44Q7Z6P3 723 aaPredicted RBP13.23□□□□□ -0.29
COL25A1-206ENST00000505591 DEFB119Q8N690 84 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 TRIML1Q8N9V2 468 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 SCAMP5Q8TAC9 235 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 IPO4Q8TEX9 1081 aaKnown RBP13.23□□□□□ -0.29
COL25A1-206ENST00000505591 SCFD1Q8WVM8 642 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 HSPA12BQ96MM6 686 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 GABRG3Q99928 467 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 TRIM9Q9C026 710 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 ZDHHC5Q9C0B5 715 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 XYLT2Q9H1B5 865 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL25A1-206ENST00000505591 TLR8Q9NR97 1041 aaKnown RBP13.23□□□□□ -0.29
COL25A1-206ENST00000505591 DNAJC17Q9NVM6 304 aaKnown RBP13.23□□□□□ -0.29
COL25A1-206ENST00000505591 KBTBD4Q9NVX7 518 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 MARK1Q9P0L2 795 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 LSM7Q9UK45 103 aaKnown RBP13.23□□□□□ -0.29
COL25A1-206ENST00000505591 PCDHB9Q9Y5E1 797 aa13.23□□□□□ -0.29
COL25A1-206ENST00000505591 GFRA2O00451 464 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 CACNG3O60359 315 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 TLR5O60602 858 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 AP1G2O75843 785 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 CLSTN1O94985 981 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 IRF1P10914 325 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 P4HA1P13674 534 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 CD59P13987 128 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 HOXB3P14651 431 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-206ENST00000505591 NDUFV2P19404 249 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 TRIM21P19474 475 aaKnown RBP13.22□□□□□ -0.29
COL25A1-206ENST00000505591 WASP42768 502 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 ASIC1P78348 528 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 TRIP6Q15654 476 aaKnown RBP13.22□□□□□ -0.29
COL25A1-206ENST00000505591 ZNF699Q32M78 642 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 ZNF667Q5HYK9 610 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 EGFLAMQ63HQ2 1017 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 FAM173BQ6P4H8 233 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 PROSER1Q86XN7 944 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 SLC41A1Q8IVJ1 513 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 C12orf56Q8IXR9 622 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 RGL4Q8IZJ4 473 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 CHCHD4Q8N4Q1 142 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 ZNF419Q96HQ0 510 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-206ENST00000505591 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 BBS2Q9BXC9 721 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 FSCN3Q9NQT6 498 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 GMIPQ9P107 970 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 CYP8B1Q9UNU6 501 aa13.22□□□□□ -0.29
COL25A1-206ENST00000505591 PCDH15Q96QU1 1955 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 NEDD8-MDP1E9PL57 170 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 CLIC2O15247 247 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 TYRP14679 529 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 SYT1P21579 422 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 ATP5C1P36542 298 aaKnown RBP13.21□□□□□ -0.29
COL25A1-206ENST00000505591 ZNF132P52740 706 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 FAM193AP78312 1265 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 BIRC3Q13489 604 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 E2F4Q16254 413 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 PLEKHG6Q3KR16 790 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 PAQR9Q6ZVX9 377 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 MIB1Q86YT6 1006 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 IQUBQ8NA54 791 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 GOLGA5Q8TBA6 731 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 ADAMTS14Q8WXS8 1223 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 ZNF516Q92618 1163 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.29
COL25A1-206ENST00000505591 SMYD3Q9H7B4 428 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 MAGEF1Q9HAY2 307 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 CD248Q9HCU0 757 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 KRT82Q9NSB4 513 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 HCN2Q9UL51 889 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 NFE2L3Q9Y4A8 694 aa13.21□□□□□ -0.29
COL25A1-206ENST00000505591 APC2O95996 2303 aa13.21□□□□□ -0.3
COL25A1-206ENST00000505591 CEP192Q8TEP8 1941 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 NPC1O15118 1278 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 TRIM24O15164 1050 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 EXOC3O60645 756 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 GJB3O75712 270 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 NASPP49321 788 aaPredicted RBP13.2□□□□□ -0.3
COL25A1-206ENST00000505591 DGKGP49619 791 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 CDH8P55286 799 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 NCOA4Q13772 614 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 STARD3Q14849 445 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 STK38Q15208 465 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 E2F5Q15329 346 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 BMT2Q1RMZ1 405 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 UNC13DQ70J99 1090 aa13.2□□□□□ -0.3
COL25A1-206ENST00000505591 METTL3Q86U44 580 aaKnown RBP13.2□□□□□ -0.3
COL25A1-206ENST00000505591 NAXDQ8IW45 347 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms