RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 P4HA1P13674 534 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 PLA2G4AP47712 749 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 DGKGP49619 791 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 AP3M2P53677 418 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 GRIK2Q13002 908 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 SF3A1Q15459 793 aaKnown RBP10.49□□□□□ -0.73
NEDD9-210ENST00000505589 TEAD4Q15561 434 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 TMEM25Q86YD3 366 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 PNPLA1Q8N8W4 532 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 LRIG1Q96JA1 1093 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 MRGPRX1Q96LB2 322 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 BBS2Q9BXC9 721 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 PRDM16Q9HAZ2 1276 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 DMAP1Q9NPF5 467 aaPredicted RBP10.49□□□□□ -0.73
NEDD9-210ENST00000505589 PANK4Q9NVE7 773 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 WSB2Q9NYS7 404 aaPredicted RBP10.49□□□□□ -0.73
NEDD9-210ENST00000505589 IL37Q9NZH6 218 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 MARK1Q9P0L2 795 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 CGNQ9P2M7 1197 aaKnown RBP10.49□□□□□ -0.73
NEDD9-210ENST00000505589 SMC3Q9UQE7 1217 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 MYO16Q9Y6X6 1858 aa10.49□□□□□ -0.73
NEDD9-210ENST00000505589 FAM92AA1XBS5 289 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 NEDD8-MDP1E9PL57 170 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 BCAT2O15382 392 aaPredicted RBP10.48□□□□□ -0.73
NEDD9-210ENST00000505589 CACNG3O60359 315 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 CBFA2T3O75081 653 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 NCAM1P13591 858 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 TYRP14679 529 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 NDUFV2P19404 249 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 GJB2P29033 226 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 PSEN1P49768 467 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 KCNA1Q09470 495 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 SFSWAPQ12872 951 aaKnown RBP10.48□□□□□ -0.73
NEDD9-210ENST00000505589 INAVAQ3KP66 663 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 KIAA1324Q6UXG2 1013 aaKnown RBP10.48□□□□□ -0.73
NEDD9-210ENST00000505589 LRRC69Q6ZNQ3 347 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 BBS7Q8IWZ6 715 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 B3GALNT2Q8NCR0 500 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 PRCCQ92733 491 aaPredicted RBP10.48□□□□□ -0.73
NEDD9-210ENST00000505589 SKA1Q96BD8 255 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 DNAJC19Q96DA6 116 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 SIPA1Q96FS4 1042 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 SMARCD1Q96GM5 515 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 CAMK1GQ96NX5 476 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 UBL7Q96S82 380 aaPredicted RBP10.48□□□□□ -0.73
NEDD9-210ENST00000505589 CDK5RAP1Q96SZ6 601 aaKnown RBP10.48□□□□□ -0.73
NEDD9-210ENST00000505589 CBWD1Q9BRT8 395 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 MED10Q9BTT4 135 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 GAREM1Q9H706 876 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 FSCN3Q9NQT6 498 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 TBC1D7Q9P0N9 293 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 SRPRBQ9Y5M8 271 aaKnown RBP10.48□□□□□ -0.73
NEDD9-210ENST00000505589 PTPRDP23468 1912 aa10.48□□□□□ -0.73
NEDD9-210ENST00000505589 KIAA1549LQ6ZVL6 1849 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 MYO18AQ92614 2054 aaKnown RBP10.47□□□□□ -0.73
NEDD9-210ENST00000505589 A0A087WV48 116 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 FRMD3A2A2Y4 597 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 METTL12A8MUP2 240 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 HAX1O00165 279 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 CAPN9O14815 690 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 TNFSF14O43557 240 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 TLR5O60602 858 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 PHACTR2O75167 634 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 CST3P01034 146 aaPredicted RBP10.47□□□□□ -0.73
NEDD9-210ENST00000505589 ZDHHC11BP0C7U3 371 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 CHRM1P11229 460 aaPredicted RBP10.47□□□□□ -0.73
NEDD9-210ENST00000505589 PDCP20941 246 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 WASP42768 502 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 AFF3P51826 1226 aaKnown RBP10.47□□□□□ -0.73
NEDD9-210ENST00000505589 COG7P83436 770 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 ARID5AQ03989 594 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 MESP2Q0VG99 397 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 RABEP1Q15276 862 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 EGFLAMQ63HQ2 1017 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 KLHDC10Q6PID8 442 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 SLCO6A1Q86UG4 719 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 TMPRSS12Q86WS5 348 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 SFTPA1Q8IWL2 248 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 OR5B17Q8NGF7 314 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 MDM1Q8TC05 714 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 TOE1Q96GM8 510 aaKnown RBP10.47□□□□□ -0.73
NEDD9-210ENST00000505589 EPSTI1Q96J88 318 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 MRPL45Q9BRJ2 306 aaKnown RBP10.47□□□□□ -0.73
NEDD9-210ENST00000505589 GPR174Q9BXC1 333 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 B3GNT5Q9BYG0 378 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 DCLK3Q9C098 648 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 MIR1-1HGQ9H1L0 117 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 ZDHHC4Q9NPG8 344 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 SLC27A6Q9Y2P4 619 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 RAXQ9Y2V3 346 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 IGF2RP11717 2491 aa10.47□□□□□ -0.73
NEDD9-210ENST00000505589 CEP192Q8TEP8 1941 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 ANTXRLA6NF34 631 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 TRABD2BA6NFA1 517 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 EIF3DO15371 548 aaKnown RBP eCLIP10.46□□□□□ -0.73
NEDD9-210ENST00000505589 RRP8O43159 456 aaKnown RBP10.46□□□□□ -0.73
NEDD9-210ENST00000505589 HCRTO43612 131 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 CILPO75339 1184 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 CYBBP04839 570 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 C1SP09871 688 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms