RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 CD248Q9HCU0 757 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 SLC39A2Q9NP94 309 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 OSER1Q9NX31 292 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 GMIPQ9P107 970 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 HMGXB4Q9UGU5 601 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 PILRBQ9UKJ0 227 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 R3HCC1Q9Y3T6 440 aaKnown RBP6.21□□□□□ -1.42
GYPB-205ENST00000505583 SPEGQ15772 3267 aa6.21□□□□□ -1.42
GYPB-205ENST00000505583 E2F8A0AVK6 867 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 FAM92AA1XBS5 289 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 LRRIQ3A6PVS8 624 aaPredicted RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 PRRT4C9JH25 899 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 SMAPO00193 183 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 SLC9A3R1O14745 358 aaPredicted RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 MDM4O15151 490 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 SPTLC2O15270 562 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 HOXC11O43248 304 aaPredicted RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 STX6O43752 255 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 HYAL3O43820 417 aaPredicted RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 STAU1O95793 577 aaKnown RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 ADH1CP00326 375 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 C4BPAP04003 597 aaKnown RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 TNFRSF4P43489 277 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 PPP3CCP48454 512 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 SLC5A3P53794 718 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 CLDN10P78369 228 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 SEMA3BQ13214 749 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 CUL4BQ13620 913 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 BMT2Q1RMZ1 405 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 ANO4Q32M45 955 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 EOGTQ5NDL2 527 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 C10orf76Q5T2E6 689 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 HECTD3Q5T447 861 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 FOXD4L5Q5VV16 416 aaPredicted RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 SNX30Q5VWJ9 437 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 PEAR1Q5VY43 1037 aaPredicted RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 SPOPLQ6IQ16 392 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 CNNM4Q6P4Q7 775 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 SLC23A3Q6PIS1 610 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 SCARA5Q6ZMJ2 495 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 STXBP4Q6ZWJ1 553 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 LPCAT2Q7L5N7 544 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 GPRIN1Q7Z2K8 1008 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 PIP4P1Q86T03 277 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 ACOT1Q86TX2 421 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 C11orf74Q86VG3 221 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 SYT12Q8IV01 421 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 SLC41A1Q8IVJ1 513 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 GRAMD1CQ8IYS0 662 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 PGBD3Q8N328 593 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 ZNF513Q8N8E2 541 aaPredicted RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 KIAA1958Q8N8K9 716 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 C12orf29Q8N999 325 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 TERB1Q8NA31 727 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 CCDC26Q8TAB7 109 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 PARD3BQ8TEW8 1205 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 FOXD4L4Q8WXT5 416 aaPredicted RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 POM121Q96HA1 1249 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 TWNKQ96RR1 684 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 UPF2Q9HAU5 1272 aaKnown RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 KIAA1586Q9HCI6 787 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 POLMQ9NP87 494 aaPredicted RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.2□□□□□ -1.422e-23■■■■■ 397.5
GYPB-205ENST00000505583 SPHK2Q9NRA0 654 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 KRT82Q9NSB4 513 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 EHD2Q9NZN4 543 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 CALCOCO1Q9P1Z2 691 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 BCCIPQ9P287 314 aaKnown RBP eCLIP6.2□□□□□ -1.42
GYPB-205ENST00000505583 TBC1D14Q9P2M4 693 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 EVLQ9UI08 416 aaPredicted RBP6.2□□□□□ -1.42
GYPB-205ENST00000505583 NUDT5Q9UKK9 219 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 KLK13Q9UKR3 277 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 RAD54BQ9Y620 910 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 PCNX2A6NKB5 2137 aa6.2□□□□□ -1.42
GYPB-205ENST00000505583 GON4LQ3T8J9 2241 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 CEP295Q9C0D2 2601 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 PLXNB3Q9ULL4 1909 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 IGHV1OR15-9A0A0B4J2B8 117 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 TBC1D3BA6NDS4 549 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 SRRM3A6NNA2 597 aaPredicted RBP6.19□□□□□ -1.42
GYPB-205ENST00000505583 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.19□□□□□ -1.42
GYPB-205ENST00000505583 WASH3PC4AMC7 463 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 HHLA1C9JL84 531 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 POLR2DO15514 142 aaKnown RBP6.19□□□□□ -1.42
GYPB-205ENST00000505583 CYP26A1O43174 497 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 KLRC4O43908 158 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 TLR5O60602 858 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 EXOC3O60645 756 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 PHACTR2O75167 634 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 PPP6R2O75170 966 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 AP1G2O75843 785 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 ALDH1A2O94788 518 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 RTN3O95197 1032 aaPredicted RBP6.19□□□□□ -1.42
GYPB-205ENST00000505583 CAPNS1P04632 268 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 CFIP05156 583 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 FAM163BP0C2L3 166 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 CD59P13987 128 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 HOXB2P14652 356 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 NDUFV2P19404 249 aa6.19□□□□□ -1.42
GYPB-205ENST00000505583 ATICP31939 592 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms