RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 DENND3A2RUS2 1198 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 RALAP11233 206 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 MTMR2Q13614 643 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 CCDC153Q494R4 210 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 CYP2W1Q8TAV3 490 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 ACTRT2Q8TDY3 377 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 USP6NLQ92738 828 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 SPATA17Q96L03 361 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 CNBD2Q96M20 576 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 HEPHQ9BQS7 1158 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 LIN28AQ9H9Z2 209 aaKnown RBP13.77□□□□□ -0.2
LETM1-203ENST00000505551 UBE2TQ9NPD8 197 aaPredicted RBP13.77□□□□□ -0.2
LETM1-203ENST00000505551 SLC38A7Q9NVC3 462 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 NYAP2Q9P242 653 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 SORCS3Q9UPU3 1222 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 POMPQ9Y244 141 aa13.77□□□□□ -0.2
LETM1-203ENST00000505551 GPC6Q9Y625 555 aaPredicted RBP13.77□□□□□ -0.2
LETM1-203ENST00000505551 SOBPA7XYQ1 873 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 SGPL1O95470 568 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 EGFRP00533 1210 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 PTP4A2Q12974 167 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 DGKZQ13574 1117 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 ACAP1Q15027 740 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 ARHGEF6Q15052 776 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 PRR16Q569H4 304 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 AMIGO2Q86SJ2 522 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 TICAM1Q8IUC6 712 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 ARHGEF19Q8IW93 802 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 PQLC1Q8N2U9 271 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 GLIS1Q8NBF1 620 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 SLC2A11Q9BYW1 496 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 IKZF4Q9H2S9 585 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 ACSS3Q9H6R3 686 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 TRPC7Q9HCX4 862 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 CDH22Q9UJ99 828 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 EIF3DO15371 548 aaKnown RBP eCLIP13.77□□□□□ -0.21
LETM1-203ENST00000505551 SORBS2O94875 1100 aaKnown RBP13.77□□□□□ -0.21
LETM1-203ENST00000505551 OXSR1O95747 527 aaPredicted RBP13.77□□□□□ -0.21
LETM1-203ENST00000505551 FUCA1P04066 466 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 TFPTP0C1Z6 253 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 BMP3P12645 472 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 EPHB1P54762 984 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 ALDH18A1P54886 795 aaKnown RBP13.77□□□□□ -0.21
LETM1-203ENST00000505551 FMO1Q01740 532 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 KCNC4Q03721 635 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 SLC18A2Q05940 514 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 UBAP2LQ14157 1087 aaKnown RBP13.77□□□□□ -0.21
LETM1-203ENST00000505551 KLHL38Q2WGJ6 581 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 RALGPS1Q5JS13 557 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 DEPDC1Q5TB30 811 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 SH2D5Q6ZV89 423 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 LPCAT2Q7L5N7 544 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 GSTA5Q7RTV2 222 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 TRPC4APQ8TEL6 797 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 RANBP9Q96S59 729 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 HAUS8Q9BT25 410 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 MRIQ9BWK5 157 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 HEMGNQ9BXL5 484 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 MRGBPQ9NV56 204 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 IGSF9Q9P2J2 1179 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 PSMD13Q9UNM6 376 aa13.77□□□□□ -0.21
LETM1-203ENST00000505551 FOXD2O60548 495 aaPredicted RBP13.76□□□□□ -0.21
LETM1-203ENST00000505551 ENDOUP21128 410 aaKnown RBP13.76□□□□□ -0.21
LETM1-203ENST00000505551 GLRA2P23416 452 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 BAG6P46379 1132 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 CLK2P49760 499 aaKnown RBP13.76□□□□□ -0.21
LETM1-203ENST00000505551 CSE1LP55060 971 aaKnown RBP13.76□□□□□ -0.21
LETM1-203ENST00000505551 PSMC6P62333 389 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 TFDP1Q14186 410 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 RWDD4Q6NW29 188 aaKnown RBP13.76□□□□□ -0.21
LETM1-203ENST00000505551 DCLRE1AQ6PJP8 1040 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 ARID3BQ8IVW6 561 aaPredicted RBP13.76□□□□□ -0.21
LETM1-203ENST00000505551 FHDC1Q9C0D6 1143 aaPredicted RBP13.76□□□□□ -0.21
LETM1-203ENST00000505551 BCAS3Q9H6U6 928 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 OLFML3Q9NRN5 406 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 DMAC2Q9NW81 257 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 SHOC2Q9UQ13 582 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 SMCHD1A6NHR9 2005 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 I3L4J1 428 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 MEIS1O00470 390 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 ATP2A1O14983 1001 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 OCM2P0CE71 109 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 OCMP0CE72 109 aaPredicted RBP13.76□□□□□ -0.21
LETM1-203ENST00000505551 S100A1P23297 94 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 PHBP35232 272 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 RNASEH2BQ5TBB1 312 aaKnown RBP13.76□□□□□ -0.21
LETM1-203ENST00000505551 TMEM126BQ8IUX1 230 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.76□□□□□ -0.21
LETM1-203ENST00000505551 BORCS5Q969J3 196 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 SGF29Q96ES7 293 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 FBXO28Q9NVF7 368 aa13.76□□□□□ -0.21
LETM1-203ENST00000505551 ASTN2O75129 1339 aaPredicted RBP13.75□□□□□ -0.21
LETM1-203ENST00000505551 SDR42E2A6NKP2 422 aa13.75□□□□□ -0.21
LETM1-203ENST00000505551 GOLGA8TH3BQL2 631 aa13.75□□□□□ -0.21
LETM1-203ENST00000505551 MEIS2O14770 477 aa13.75□□□□□ -0.21
LETM1-203ENST00000505551 MT-ND3P03897 115 aa13.75□□□□□ -0.21
LETM1-203ENST00000505551 AQP5P55064 265 aa13.75□□□□□ -0.21
LETM1-203ENST00000505551 CXCL9Q07325 125 aa13.75□□□□□ -0.21
LETM1-203ENST00000505551 FBXO11Q86XK2 927 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms