RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 HCRTO43612 131 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 CILPO75339 1184 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 GFPT2O94808 682 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 PROS1P07225 676 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 SOX5P35711 763 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 GNL1P36915 607 aaPredicted RBP16.61■□□□□ 0.25
PDCD6-203ENST00000505526 TUFMP49411 452 aaKnown RBP16.61■□□□□ 0.25
PDCD6-203ENST00000505526 NDST1P52848 882 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 ORC1Q13415 861 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 RUNX3Q13761 415 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 SLC39A12Q504Y0 691 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 ZNF394Q53GI3 561 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 RNF43Q68DV7 783 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 OSTM1Q86WC4 334 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 FAM71AQ8IYT1 594 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 TTC39CQ8N584 583 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 RBBP8NLQ8NC74 664 aaPredicted RBP16.61■□□□□ 0.25
PDCD6-203ENST00000505526 OR10T2Q8NGX3 314 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 FAM83CQ9BQN1 747 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 NME7Q9Y5B8 376 aa16.61■□□□□ 0.25
PDCD6-203ENST00000505526 A8MXQ7 604 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 TRDMT1O14717 391 aaKnown RBP16.6■□□□□ 0.25
PDCD6-203ENST00000505526 GABRDO14764 452 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 CYP26A1O43174 497 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 FAM163BP0C2L3 166 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 ATF6P18850 670 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 LMO2P25791 158 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 LHX1P48742 406 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 CDR1P51861 262 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 ARID5AQ03989 594 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 TAF12Q16514 161 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 MGAT5BQ3V5L5 792 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 PLK5Q496M5 336 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 SFMBT2Q5VUG0 894 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 E4F1Q66K89 784 aaPredicted RBP16.6■□□□□ 0.25
PDCD6-203ENST00000505526 PSAPL1Q6NUJ1 521 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 CMTM8Q8IZV2 173 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 CAMKK1Q8N5S9 505 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 TC2NQ8N9U0 490 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 OR8K1Q8NGG5 319 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 WHAMMQ8TF30 809 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 CHFRQ96EP1 664 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 TWNKQ96RR1 684 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 ELOVL4Q9GZR5 314 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 NUCKS1Q9H1E3 243 aaKnown RBP16.6■□□□□ 0.25
PDCD6-203ENST00000505526 EBF3Q9H4W6 596 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 HPS4Q9NQG7 708 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 ABHD10Q9NUJ1 306 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 POLR3BQ9NW08 1133 aaPredicted RBP16.6■□□□□ 0.25
PDCD6-203ENST00000505526 DDX43Q9NXZ2 648 aaKnown RBP16.6■□□□□ 0.25
PDCD6-203ENST00000505526 CNTN6Q9UQ52 1028 aa16.6■□□□□ 0.25
PDCD6-203ENST00000505526 SPAG17Q6Q759 2223 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 OTOL1A6NHN0 477 aaPredicted RBP16.59■□□□□ 0.25
PDCD6-203ENST00000505526 RNF40O75150 1001 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 EGFP01133 1207 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 PDGFRBP09619 1106 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 ZNF132P52740 706 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 RAD23BP54727 409 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 CCDC173Q0VFZ6 552 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 ASIC2Q16515 512 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 TRIM68Q6AZZ1 485 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 TCEAL6Q6IPX3 200 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 CCDC186Q7Z3E2 898 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 UNC93AQ86WB7 457 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 SPATA18Q8TC71 538 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 GIPC2Q8TF65 315 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 TCEAL3Q969E4 200 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 DNAJC7Q99615 494 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 NT5C1AQ9BXI3 368 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 ZCWPW1Q9H0M4 648 aa16.59■□□□□ 0.25
PDCD6-203ENST00000505526 CALCAP01258 141 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 FERP16591 822 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 ACAT1P24752 427 aaKnown RBP16.58■□□□□ 0.24
PDCD6-203ENST00000505526 CLCN1P35523 988 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 AVPR1AP37288 418 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 GSDMDP57764 484 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 ARID5BQ14865 1188 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 TSR1Q2NL82 804 aaKnown RBP16.58■□□□□ 0.24
PDCD6-203ENST00000505526 THEM5Q8N1Q8 247 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 SLC4A11Q8NBS3 891 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 TMEM176AQ96HP8 235 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 HHIPQ96QV1 700 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 DUSP15Q9H1R2 295 aaPredicted RBP16.58■□□□□ 0.24
PDCD6-203ENST00000505526 DPEP3Q9H4B8 488 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 FBRSL1Q9HCM7 1045 aaKnown RBP16.58■□□□□ 0.24
PDCD6-203ENST00000505526 ACP6Q9NPH0 428 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 AIPL1Q9NZN9 384 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 ZMYM5Q9UJ78 669 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 CCL26Q9Y258 94 aa16.58■□□□□ 0.24
PDCD6-203ENST00000505526 NOVA1P51513 510 aaKnown RBP16.57■□□□□ 0.24
PDCD6-203ENST00000505526 PSMC1P62191 440 aaKnown RBP16.57■□□□□ 0.24
PDCD6-203ENST00000505526 AMPD2Q01433 879 aa16.57■□□□□ 0.24
PDCD6-203ENST00000505526 ELF2Q15723 593 aa16.57■□□□□ 0.24
PDCD6-203ENST00000505526 IRF2BP2Q7Z5L9 587 aa16.57■□□□□ 0.24
PDCD6-203ENST00000505526 ACOT1Q86TX2 421 aa16.57■□□□□ 0.24
PDCD6-203ENST00000505526 SLC47A2Q86VL8 602 aa16.57■□□□□ 0.24
PDCD6-203ENST00000505526 FMNL3Q8IVF7 1028 aa16.57■□□□□ 0.24
PDCD6-203ENST00000505526 MAB21L3Q8N8X9 362 aa16.57■□□□□ 0.24
PDCD6-203ENST00000505526 SYN2Q92777 582 aaPredicted RBP16.57■□□□□ 0.24
PDCD6-203ENST00000505526 USP13Q92995 863 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms