RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 CSHL1Q14406 222 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 RPS6KA2Q15349 733 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 KAZNQ674X7 775 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 DPY19L3Q6ZPD9 716 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 GCC1Q96CN9 775 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 EID2BQ96D98 161 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 VPS50Q96JG6 964 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 RTKNQ9BST9 563 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 TAF1DQ9H5J8 278 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 MLXIPQ9HAP2 919 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 SEPSECSQ9HD40 501 aaKnown RBP5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 VPS51Q9UID3 782 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 RIMKLBQ9ULI2 386 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 GTF2A1LQ9UNN4 478 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 ADGRA2Q96PE1 1338 aa5.7□□□□□ -1.5
TRAPPC13-205ENST00000504243 ZAR1LA6NP61 321 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 M0R3H8 397 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 AP4M1O00189 453 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 CES2O00748 559 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 WDR47O94967 919 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 FGAP02671 866 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 SLPIP03973 132 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 ZEB1P37275 1124 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 FOLR3P41439 243 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 TPTEP56180 551 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 EIF4A1P60842 406 aaKnown RBP5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 BLOC1S1P78537 153 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 DPTQ07507 201 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 BMPR2Q13873 1038 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 GRM4Q14833 912 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 TRIM71Q2Q1W2 868 aaKnown RBP5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 BTBD16Q32M84 506 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 ADCK5Q3MIX3 580 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 PLAC9Q5JTB6 97 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 LIN54Q6MZP7 749 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 RRAGAQ7L523 313 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 KRT27Q7Z3Y8 459 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 METTL25Q8N6Q8 603 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 NGDNQ8NEJ9 315 aaKnown RBP5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 SUN3Q8TAQ9 357 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 SOCS4Q8WXH5 440 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 FUBP1Q96AE4 644 aaKnown RBP5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 C3orf49Q96BT1 292 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 NAP1L4Q99733 375 aaKnown RBP5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 TP63Q9H3D4 680 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 RRN3Q9NYV6 651 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 KIF17Q9P2E2 1029 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 LRIT1Q9P2V4 623 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 LPAR3Q9UBY5 353 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 GPR52Q9Y2T5 361 aa5.69□□□□□ -1.5
TRAPPC13-205ENST00000504243 VWC2LB2RUY7 222 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 ORC4O43929 436 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 PPP6R2O75170 966 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 ONECUT2O95948 504 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 IL6RP08887 468 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 HKR1P10072 659 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 VEGFAP15692 232 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 CREB1P16220 341 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 NDUFB7P17568 137 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 PBX1P40424 430 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 INHBCP55103 352 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 ARL4CP56559 192 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 SUMO2P61956 95 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 PTPRRQ15256 657 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 ST3GAL2Q16842 350 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 TMEM196Q5HYL7 178 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 LAIR1Q6GTX8 287 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 Q6ZNX1 250 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 ZNF627Q7L945 461 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 SLC44A2Q8IWA5 706 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 SUGP1Q8IWZ8 645 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 OR1N1Q8NGS0 311 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 SCAMP5Q8TAC9 235 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 OTUD7AQ8TE49 926 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 AFG1LQ8WV93 481 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 GOLGA1Q92805 767 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 TRAPPC9Q96Q05 1148 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 MRIQ9BWK5 157 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 ELAC1Q9H777 363 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 SAYSD1Q9NPB0 183 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 ARHGEF3Q9NR81 526 aa5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 ING1Q9UK53 422 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-205ENST00000504243 OR2W5A6NFC9 320 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 QSOX1O00391 747 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 MPPED1O15442 326 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 PROM1O43490 865 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 SH3BP5O60239 455 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 PMPCBO75439 489 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 PRKCBP05771 671 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 DLDP09622 509 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 ENGP17813 658 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 CYP2C18P33260 490 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 AVPR1BP47901 424 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 HMGA2P52926 109 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 MRPS35P82673 323 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 CLCA4Q14CN2 919 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 TXNRD1Q16881 649 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 ZNF569Q5MCW4 686 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 RAB11FIP2Q7L804 512 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 MRGPRGQ86SM5 289 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms