RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 KRT12Q99456 494 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 TINF2Q9BSI4 451 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 MFFQ9GZY8 342 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 LSG1Q9H089 658 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 C19orf44Q9H6X5 657 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 FANCEQ9HB96 536 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PCDHGB4Q9UN71 923 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 TNNQ9UQP3 1299 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PTPN22Q9Y2R2 807 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 RPAP1Q9BWH6 1393 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 NEURL4Q96JN8 1562 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 KDM6BO15054 1643 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 NAIPQ13075 1403 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ATXN2Q99700 1313 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 MOCS2O96007 188 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 VARSP26640 1264 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PTPN6P29350 595 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 IREB2P48200 963 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 AIF1P55008 147 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 B2MP61769 119 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 RPL10AP62906 217 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 FAM209AQ5JX71 171 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ATAD3CQ5T2N8 411 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ATL3Q6DD88 541 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SNX20Q7Z614 316 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PRUNE1Q86TP1 453 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 NLRP10Q86W26 655 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 GSPT2Q8IYD1 628 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 AOPEPQ8N6M6 819 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 AKR7LQ8NHP1 331 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 WDR24Q96S15 920 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 TM9SF2Q99805 663 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 MYD88Q99836 296 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PAPOLGQ9BWT3 736 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 C1orf21Q9H246 121 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CLEC4MQ9H2X3 399 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 HIPK2Q9H2X6 1198 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 FBXO28Q9NVF7 368 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 REV1Q9UBZ9 1251 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CRYL1Q9Y2S2 319 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF451Q9Y4E5 1061 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 GRID2IPA4D2P6 1211 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ABCB1P08183 1280 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SFTPCP11686 197 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 IL1R1P14778 569 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ITGB6P18564 788 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CHRNA5P30532 468 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 BMI1P35226 326 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SULT2A1Q06520 285 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ILF2Q12905 390 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PDIA2Q13087 525 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ADAM9Q13443 819 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 MPP7Q5T2T1 576 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SNX30Q5VWJ9 437 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 AFMIDQ63HM1 303 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 KCNG4Q8TDN1 519 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ZFP42Q96MM3 310 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 GBA3Q9H227 469 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 NGRNQ9NPE2 291 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 TOR4AQ9NXH8 423 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PCDH10Q9P2E7 1040 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 KCNN3Q9UGI6 736 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SLC24A2Q9UI40 661 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 NFU1Q9UMS0 254 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 AP4E1Q9UPM8 1137 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PCDHGB6Q9Y5F9 930 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 RTEL1-TNFRSF6BF6WH68 1400 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 MAP3K4Q9Y6R4 1608 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ZFYVE16Q7Z3T8 1539 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ILVBLA1L0T0 632 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CCT8L1PA6NM43 557 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 RHPN2P1A8MT19 583 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 HSBP1L1C9JCN9 74 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 I3L521 148 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 DFFAO00273 331 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 MFAP3LO75121 409 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 MLLT3P42568 568 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 MAGEA1P43355 309 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PIP4K2AP48426 406 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CCT4P50991 539 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 HSF2Q03933 536 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 DNM1Q05193 864 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF33BQ06732 778 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 LLGL1Q15334 1064 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 KRT79Q5XKE5 535 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 KRT40Q6A162 431 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 GSTA5Q7RTV2 222 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CYP4X1Q8N118 509 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PLD5Q8N7P1 536 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 MCPH1Q8NEM0 835 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CA5BP1Q8WTZ4 195 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 U2AF1L4Q8WU68 220 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PRICKLE1Q96MT3 831 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CITED1Q99966 193 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ASIC3Q9UHC3 531 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF221Q9UK13 617 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 C14orf166Q9Y224 244 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CA5BQ9Y2D0 317 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SBNO1A3KN83 1393 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 GTPBP1O00178 669 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms