RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 RRP8O43159 456 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 WARSP23381 471 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 OXTRP30559 389 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 EIF2S3P41091 472 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 MCM6Q14566 821 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 STARD3Q14849 445 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 MDH1BQ5I0G3 518 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 LARP1BQ659C4 914 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 LIMS2Q7Z4I7 341 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 TMPRSS12Q86WS5 348 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 OVCA2Q8WZ82 227 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 FBXO32Q969P5 355 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 HPDLQ96IR7 371 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 FCRL3Q96P31 734 aaPredicted RBP16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 BBS2Q9BXC9 721 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 MTMR12Q9C0I1 747 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 USP36Q9P275 1121 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 EIF2B4Q9UI10 523 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 EXOC7Q9UPT5 735 aa16.8■□□□□ 0.28
PDLIM7-210ENST00000503827 TENM4Q6N022 2769 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 A0A1B0GVT2 93 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 WASH3PC4AMC7 463 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 PLK4O00444 970 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 CACNG3O60359 315 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 RTN3O95197 1032 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 UBA7P41226 1012 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 GRK6P43250 576 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 PTPRNQ16849 979 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 RILPL1Q5EBL4 403 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 ARL6IP4Q66PJ3 421 aaKnown RBP16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 DHRS13Q6UX07 377 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 ZNF720Q7Z2F6 126 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 NUP93Q8N1F7 819 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 ANKRD36BP1Q96IX9 119 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 FAM84AQ96KN4 292 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 AK8Q96MA6 479 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 MMS19Q96T76 1030 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 ELOVL4Q9GZR5 314 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 NACA2Q9H009 215 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 BLOC1S4Q9NUP1 217 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 WDR35Q9P2L0 1181 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 CHORDC1Q9UHD1 332 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 LIMCH1Q9UPQ0 1083 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 CABIN1Q9Y6J0 2220 aa16.79■□□□□ 0.28
PDLIM7-210ENST00000503827 IRF1P10914 325 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 TYRP14679 529 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 DGKGP49619 791 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 CFHR1Q03591 330 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 FUT11Q495W5 492 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 C6orf118Q5T5N4 469 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 KRI1Q8N9T8 703 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 ZSWIM2Q8NEG5 633 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 NOC3LQ8WTT2 800 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 RAD54LQ92698 747 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 SNX25Q9H3E2 840 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 PDE11AQ9HCR9 933 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 STON1Q9Y6Q2 735 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 KNTC1P50748 2209 aa16.78■□□□□ 0.28
PDLIM7-210ENST00000503827 TEX51A0A1B0GUA7 166 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 KCNJ18B7U540 433 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 TNNC2P02585 160 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 GARTP22102 1010 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 GNL1P36915 607 aaPredicted RBP16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 CSNK1EP49674 416 aaKnown RBP16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 TUBP50607 506 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 TPMTP51580 245 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 AFF3P51826 1226 aaKnown RBP16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 ZNF132P52740 706 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 CACNA2D1P54289 1103 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 SNX30Q5VWJ9 437 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 TPGS1Q6ZTW0 290 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 GPR155Q7Z3F1 870 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 SFR1Q86XK3 245 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 BAP1Q92560 729 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 WBP2Q969T9 261 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 ACCSQ96QU6 501 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 NUP58Q9BVL2 599 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 CCSER2Q9H7U1 834 aa16.77■□□□□ 0.28
PDLIM7-210ENST00000503827 NAV2Q8IVL1 2488 aa16.77■□□□□ 0.27
PDLIM7-210ENST00000503827 TP53BP1Q12888 1972 aaPredicted RBP16.77■□□□□ 0.27
PDLIM7-210ENST00000503827 MYLKQ15746 1914 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 GOLGA8IPA6NC78 632 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 GOLGA8JA6NMD2 632 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 PPP1R37O75864 691 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 JUPP14923 745 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 PTPN1P18031 435 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 HNF1BP35680 557 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 SEMG2Q02383 582 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 TEAD4Q15561 434 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 KIF19Q2TAC6 998 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 INAVAQ3KP66 663 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 HTR3DQ70Z44 454 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 OR6B3Q8NGW1 331 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 C1orf216Q8TAB5 229 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 LARP4BQ92615 738 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 PRCCQ92733 491 aaPredicted RBP16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 SIPA1Q96FS4 1042 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 ZNF518BQ9C0D4 1074 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms