RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GYPCP04921 128 aa26.33■■□□□ 1.81
LSM6-202ENST00000502781 SIGLEC14Q08ET2 396 aa26.33■■□□□ 1.81
LSM6-202ENST00000502781 HFE2Q6ZVN8 426 aa26.33■■□□□ 1.81
LSM6-202ENST00000502781 MIS12Q9H081 205 aa26.33■■□□□ 1.81
LSM6-202ENST00000502781 TRPV5Q9NQA5 729 aa26.33■■□□□ 1.81
LSM6-202ENST00000502781 ABCC13Q9NSE7 274 aa26.33■■□□□ 1.81
LSM6-202ENST00000502781 LEFTY2O00292 366 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 GDI1P31150 447 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 PRKCIP41743 596 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 GABRB2P47870 512 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 ARHGAP29Q52LW3 1261 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 C10orf120Q5SQS8 335 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 TADA2BQ86TJ2 420 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 VSTM4Q8IW00 320 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 OLIG1Q8TAK6 271 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 PCDHB18PQ96TA0 734 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 WNT16Q9UBV4 365 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 DNMT3LQ9UJW3 386 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 NUDT5Q9UKK9 219 aa26.33■■□□□ 1.8
LSM6-202ENST00000502781 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.33■■□□□ 1.8
LSM6-202ENST00000502781 ZNF263O14978 683 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 LTFP02788 710 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 ERBB2P04626 1255 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 ZBED6P86452 979 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 PLCB2Q00722 1185 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 MTF1Q14872 753 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 SFMBT2Q5VUG0 894 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 BTBD8Q5XKL5 378 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 SPECC1LQ69YQ0 1117 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 TRIM72Q6ZMU5 477 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 TRIM67Q6ZTA4 783 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 BEND5Q7L4P6 421 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 DDX42Q86XP3 938 aaKnown RBP eCLIP26.32■■□□□ 1.8
LSM6-202ENST00000502781 SYN2Q92777 582 aaPredicted RBP26.32■■□□□ 1.8
LSM6-202ENST00000502781 DNASE1L2Q92874 299 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 IRF7Q92985 503 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 ASIC4Q96FT7 647 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 FAM83CQ9BQN1 747 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 KLF16Q9BXK1 252 aaPredicted RBP26.32■■□□□ 1.8
LSM6-202ENST00000502781 NUCKS1Q9H1E3 243 aaKnown RBP26.32■■□□□ 1.8
LSM6-202ENST00000502781 BRD9Q9H8M2 597 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 THG1LQ9NWX6 298 aaKnown RBP26.32■■□□□ 1.8
LSM6-202ENST00000502781 SMPD4Q9NXE4 827 aa26.32■■□□□ 1.8
LSM6-202ENST00000502781 FYNP06241 537 aa26.31■■□□□ 1.8
LSM6-202ENST00000502781 SNX16P57768 344 aa26.31■■□□□ 1.8
LSM6-202ENST00000502781 PFKPQ01813 784 aa26.31■■□□□ 1.8
LSM6-202ENST00000502781 YAF2Q8IY57 180 aa26.31■■□□□ 1.8
LSM6-202ENST00000502781 IPO4Q8TEX9 1081 aaKnown RBP26.31■■□□□ 1.8
LSM6-202ENST00000502781 PIWIL1Q96J94 861 aaKnown RBP26.31■■□□□ 1.8
LSM6-202ENST00000502781 AGPAT1Q99943 283 aa26.31■■□□□ 1.8
LSM6-202ENST00000502781 NACA2Q9H009 215 aa26.31■■□□□ 1.8
LSM6-202ENST00000502781 GKN1Q9NS71 199 aa26.31■■□□□ 1.8
LSM6-202ENST00000502781 OLA1Q9NTK5 396 aaKnown RBP26.31■■□□□ 1.8
LSM6-202ENST00000502781 KIF26AQ9ULI4 1882 aaPredicted RBP26.31■■□□□ 1.8
LSM6-202ENST00000502781 MDM4O15151 490 aa26.3■■□□□ 1.8
LSM6-202ENST00000502781 UNGP13051 313 aaPredicted RBP26.3■■□□□ 1.8
LSM6-202ENST00000502781 ASIC2Q16515 512 aa26.3■■□□□ 1.8
LSM6-202ENST00000502781 NAA35Q5VZE5 725 aa26.3■■□□□ 1.8
LSM6-202ENST00000502781 MSANTD2Q6P1R3 559 aa26.3■■□□□ 1.8
LSM6-202ENST00000502781 CFAP97Q9P2B7 532 aa26.3■■□□□ 1.8
LSM6-202ENST00000502781 LUC7L2Q9Y383 392 aaKnown RBP26.3■■□□□ 1.8
LSM6-202ENST00000502781 HELZP42694 1942 aaKnown RBP26.29■■□□□ 1.8
LSM6-202ENST00000502781 GREM1O60565 184 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 GLI1P08151 1106 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 OLFML1Q6UWY5 402 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 ERICH1Q86X53 443 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 ZDHHC17Q8IUH5 632 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 ZNF397Q8NF99 534 aaPredicted RBP26.29■■□□□ 1.8
LSM6-202ENST00000502781 OSCP1Q8WVF1 389 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 CPA5Q8WXQ8 436 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 EDEM1Q92611 657 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 ZFYVE19Q96K21 471 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 TRIM5Q9C035 493 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 ASNSD1Q9NWL6 643 aa26.29■■□□□ 1.8
LSM6-202ENST00000502781 E2F8A0AVK6 867 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 CASP14P31944 242 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 CENPCQ03188 943 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 TRIM14Q14142 442 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 CLEC16AQ2KHT3 1053 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 IER5LQ5T953 404 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 CC2D1AQ6P1N0 951 aaPredicted RBP26.28■■□□□ 1.8
LSM6-202ENST00000502781 FAM183BPQ6ZVS7 135 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 RSRC2Q7L4I2 434 aaKnown RBP26.28■■□□□ 1.8
LSM6-202ENST00000502781 CPLX3Q8WVH0 158 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 GOLGA1Q92805 767 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 WBP2Q969T9 261 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 C18orf8Q96DM3 657 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 HAUS4Q9H6D7 363 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 MARCH2Q9P0N8 246 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 TRIOO75962 3097 aa26.28■■□□□ 1.8
LSM6-202ENST00000502781 MMP8P22894 467 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 YWHAZP63104 245 aaKnown RBP26.27■■□□□ 1.8
LSM6-202ENST00000502781 EFEMP1Q12805 493 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 TAF5Q15542 800 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 EFHC1Q5JVL4 640 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 HGSNATQ68CP4 663 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 SLC26A9Q7LBE3 791 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 RNF139Q8WU17 664 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 FAM149B1Q96BN6 582 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 TRIM62Q9BVG3 475 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms