RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 C9orf16Q9BUW7 83 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 RTFDC1Q9BY42 306 aaPredicted RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 UNKQ9C0B0 810 aaKnown RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 C1orf196B1AJZ1 125 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 E5RI56 91 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 TGM2P21980 687 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ILF3Q12906 894 aaKnown RBP eCLIP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ZNF235Q14590 738 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SPOUT1Q5T280 376 aaKnown RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PARD3Q8TEW0 1356 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 CASKIN2Q8WXE0 1202 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 COPS7BQ9H9Q2 264 aaPredicted RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 POLR3EQ9NVU0 708 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SPDYE7PQ495Y7 208 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 DDI2Q5TDH0 399 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 DEF8Q6ZN54 512 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 STOX1Q6ZVD7 989 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 MYPNQ86TC9 1320 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 H3BM21 787 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SGCEO43556 437 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 NCK2O43639 380 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 RPL17P18621 184 aaKnown RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 FGFR4P22455 802 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PSME3P61289 254 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SCUBE3Q8IX30 993 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 CPT1BQ92523 772 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 RACGAP1Q9H0H5 632 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 A0A1B0GVG6 124 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SMCO3A2RU48 225 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PRLRP16471 622 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PRMT8Q9NR22 394 aaPredicted RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 NFICP08651 508 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 CENPCQ03188 943 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 KIAA1755Q5JYT7 1200 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ARPINQ7Z6K5 226 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ZNF614Q8N883 585 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SGK3Q96BR1 496 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PHF23Q9BUL5 403 aaPredicted RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 HSPB11Q9Y547 144 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 FAM240BA0A1B0GVZ2 78 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SLC26A3P40879 764 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 KCNQ4P56696 695 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ERP44Q9BS26 406 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 IER2Q9BTL4 223 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 HIPK3Q9H422 1215 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ATMINO43313 823 aaPredicted RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 RAB4AP20338 218 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 S100PP25815 95 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SEL1L3Q68CR1 1132 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 NCOA5Q9HCD5 579 aaKnown RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PDGFCQ9NRA1 345 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 MYH10P35580 1976 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PLEKHH2Q8IVE3 1493 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PROS1P07225 676 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 NR3C2P08235 984 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PTPN6P29350 595 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 HNRNPFP52597 415 aaKnown RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ERVK-25P63136 954 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 CIR1Q86X95 450 aaPredicted RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 RTKN2Q8IZC4 609 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 CARNMT1Q8N4J0 409 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 AP1S3Q96PC3 154 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 LPIN3Q9BQK8 851 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ERVK-6Q9BXR3 956 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 FAIMQ9NVQ4 179 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 HPF1Q9NWY4 346 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ERVK-18Q9QC07 812 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SNX3O60493 162 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 TCF4P15884 667 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 G0S2P27469 103 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 MZF1P28698 734 aaPredicted RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 GPRC6AQ5T6X5 926 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ZNF772Q68DY9 489 aaPredicted RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 FASTKD5Q7L8L6 764 aaKnown RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 RELL1Q8IUW5 271 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 RFFLQ8WZ73 363 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 DHX38Q92620 1227 aaKnown RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 HEMGNQ9BXL5 484 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 CABP2Q9NPB3 220 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 THAP1Q9NVV9 213 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 APOC1P02654 83 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PSMA2P25787 234 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ZBED5Q49AG3 693 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SLC13A5Q86YT5 568 aaPredicted RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 MPP5Q8N3R9 675 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PHF12Q96QT6 1004 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PSKH1P11801 424 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 CDK17Q00537 523 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 SPATS1Q496A3 300 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ODR4Q5SWX8 454 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 ZNF274Q96GC6 653 aaPredicted RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 TMEM246Q9BRR3 403 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 PPA2Q9H2U2 334 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 URB1O60287 2271 aaKnown RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 TDRD9Q8NDG6 1382 aaKnown RBP4.92□□□□□ -1.62
NEAT1-202ENST00000501122 TSTD3H0UI37 97 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 RAD51CO43502 376 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 CST8O60676 142 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 DHFRP00374 187 aa4.92□□□□□ -1.62
NEAT1-202ENST00000501122 RPL10AP62906 217 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms