RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 USP28Q96RU2 1077 aa15.53■□□□□ 0.08
SEC61A1-207ENST00000498837 MED10Q9BTT4 135 aa15.53■□□□□ 0.08
SEC61A1-207ENST00000498837 XYLT2Q9H1B5 865 aa15.53■□□□□ 0.08
SEC61A1-207ENST00000498837 SLC6A17Q9H1V8 727 aa15.53■□□□□ 0.08
SEC61A1-207ENST00000498837 SMYD3Q9H7B4 428 aa15.53■□□□□ 0.08
SEC61A1-207ENST00000498837 AGPAT3Q9NRZ7 376 aa15.53■□□□□ 0.08
SEC61A1-207ENST00000498837 DNAJC17Q9NVM6 304 aaKnown RBP15.53■□□□□ 0.08
SEC61A1-207ENST00000498837 TP53BP1Q12888 1972 aaPredicted RBP15.53■□□□□ 0.08
SEC61A1-207ENST00000498837 PRRT4C9JH25 899 aa15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 EIF3DO15371 548 aaKnown RBP eCLIP15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 SH3BP5O60239 455 aa15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 STAU1O95793 577 aaKnown RBP15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 RDXP35241 583 aaKnown RBP15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 SLC39A14Q15043 492 aa15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 GRAMD4Q6IC98 578 aa15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 NUDT18Q6ZVK8 323 aa15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 NELFCDQ8IXH7 590 aa15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 CHPFQ8IZ52 775 aa15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 DUSP9Q99956 384 aaKnown RBP15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 TRIM9Q9C026 710 aa15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 DNAAF2Q9NVR5 837 aaKnown RBP15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 KBTBD4Q9NVX7 518 aa15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 RAD54BQ9Y620 910 aa15.52■□□□□ 0.08
SEC61A1-207ENST00000498837 URB1O60287 2271 aaKnown RBP15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 ATP8B3O60423 1300 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 A0A1W2PQD8 194 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 FAM92AA1XBS5 289 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 WASH3PC4AMC7 463 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 NEDD8-MDP1E9PL57 170 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 GREM1O60565 184 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 ZNF217O75362 1048 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 GJB3O75712 270 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 BEST1O76090 585 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 TBX18O95935 607 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 SYPP08247 313 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 SYT1P21579 422 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 MAOBP27338 520 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 ATICP31939 592 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 CASP4P49662 377 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 TUBP50607 506 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 CUL4AQ13619 759 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 TRIP6Q15654 476 aaKnown RBP15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 ZNF423Q2M1K9 1284 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 PLEKHG6Q3KR16 790 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 TPGS1Q6ZTW0 290 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 TOGARAM2Q6ZUX3 1019 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 HTR3DQ70Z44 454 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 PROSER1Q86XN7 944 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 RGL4Q8IZJ4 473 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 PNPLA1Q8N8W4 532 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 XXYLT1Q8NBI6 393 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 ZMIZ2Q8NF64 920 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 PLEKHO2Q8TD55 490 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 ZNF419Q96HQ0 510 aaPredicted RBP15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 SMOQ99835 787 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 BBS2Q9BXC9 721 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 NACA2Q9H009 215 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 SDCBP2Q9H190 292 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 TNMDQ9H2S6 317 aa15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 DMAP1Q9NPF5 467 aaPredicted RBP15.51■□□□□ 0.07
SEC61A1-207ENST00000498837 SHROOM3Q8TF72 1996 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 ZBTB24O43167 697 aaPredicted RBP15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 CACNG3O60359 315 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 TLR5O60602 858 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 PHACTR2O75167 634 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 AP1G2O75843 785 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 TYRP14679 529 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 PDCP20941 246 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 ASIC1P78348 528 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 SCAPQ12770 1279 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 E2F4Q16254 413 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 FAM26FQ5R3K3 315 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 SDE2Q6IQ49 451 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 SCARA5Q6ZMJ2 495 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 ACOT1Q86TX2 421 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 FUKQ8N0W3 1084 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 SCFD1Q8WVM8 642 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 SYAP1Q96A49 352 aaPredicted RBP15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 SMARCD1Q96GM5 515 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 XPO6Q96QU8 1125 aaKnown RBP15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 GABRG3Q99928 467 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 KLF16Q9BXK1 252 aaPredicted RBP15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 KRT82Q9NSB4 513 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 COMMD8Q9NX08 183 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 CACNA2D2Q9NY47 1150 aa15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 MORC2Q9Y6X9 1032 aaPredicted RBP15.5■□□□□ 0.07
SEC61A1-207ENST00000498837 GCN1Q92616 2671 aaKnown RBP15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 NDUFS2O75306 463 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 CISD3P0C7P0 127 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 FTH1P19P0C7X4 201 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 CCDC130P13994 396 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 SLC14A1Q13336 389 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 ORC1Q13415 861 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 HNRNPDQ14103 355 aaKnown RBP15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 C19orf48Q6RUI8 117 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 TNIP3Q96KP6 325 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 MRGPRX1Q96LB2 322 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 LRRC27Q9C0I9 530 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 OSER1Q9NX31 292 aa15.49■□□□□ 0.07
SEC61A1-207ENST00000498837 PCDHB9Q9Y5E1 797 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms