RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 KMT2EQ8IZD2 1858 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 SMTNL1A8MU46 457 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 BECN2A8MW95 431 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 FOXN3O00409 490 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-213ENST00000498495 SCAMP3O14828 347 aaKnown RBP13.44□□□□□ -0.26
HSPG2-213ENST00000498495 IRF1P10914 325 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 GALK1P51570 392 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 LRRC32Q14392 662 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 ANGPT1Q15389 498 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 DGKKQ5KSL6 1271 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 KLHDC7AQ5VTJ3 777 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 RSRC2Q7L4I2 434 aaKnown RBP13.44□□□□□ -0.26
HSPG2-213ENST00000498495 ZNF687Q8N1G0 1237 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 SHC3Q92529 594 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 NDRG1Q92597 394 aaKnown RBP13.44□□□□□ -0.26
HSPG2-213ENST00000498495 OTUB2Q96DC9 234 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 ZFRQ96KR1 1074 aaKnown RBP13.44□□□□□ -0.26
HSPG2-213ENST00000498495 LSM14BQ9BX40 385 aaKnown RBP13.44□□□□□ -0.26
HSPG2-213ENST00000498495 ACP6Q9NPH0 428 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 ST7Q9NRC1 585 aa13.44□□□□□ -0.26
HSPG2-213ENST00000498495 LSM7Q9UK45 103 aaKnown RBP13.44□□□□□ -0.26
HSPG2-213ENST00000498495 PIK3R2O00459 728 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 TRDMT1O14717 391 aaKnown RBP13.43□□□□□ -0.26
HSPG2-213ENST00000498495 MDM4O15151 490 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 LAMTOR5O43504 91 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 GPD2P43304 727 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 COPB1P53618 953 aaKnown RBP13.43□□□□□ -0.26
HSPG2-213ENST00000498495 BPIFB4P59827 614 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 COG7P83436 770 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 EFEMP1Q12805 493 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 GRSF1Q12849 480 aaKnown RBP eCLIP13.43□□□□□ -0.26
HSPG2-213ENST00000498495 RAPGEF1Q13905 1077 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 DRAP1Q14919 205 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-213ENST00000498495 NCAPHQ15003 741 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 DHCR24Q15392 516 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 BSPRYQ5W0U4 402 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 DPY19L2P1Q6NXN4 242 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 DENND1BQ6P3S1 775 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 HTR3DQ70Z44 454 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 MIB1Q86YT6 1006 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 SCML4Q8N228 414 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 AOPEPQ8N6M6 819 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 RNF139Q8WU17 664 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 CD101Q93033 1021 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 P2RY13Q9BPV8 354 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 ABCC13Q9NSE7 274 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 LIMA1Q9UHB6 759 aaKnown RBP13.43□□□□□ -0.26
HSPG2-213ENST00000498495 RASAL2Q9UJF2 1139 aa13.43□□□□□ -0.26
HSPG2-213ENST00000498495 AJAP1Q9UKB5 411 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-213ENST00000498495 LRRC10BA6NIK2 292 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 YJEFN3A6XGL0 299 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 E7ENQ6 273 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 FBXO21O94952 628 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 UCHL3P15374 230 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 DRD1P21728 446 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 KRT9P35527 623 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 ACADSBP45954 432 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 ZNF165P49910 485 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 DAOAP59103 153 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 NHLH1Q02575 133 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 GAD2Q05329 585 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 MEA1Q16626 185 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 SKOR2Q2VWA4 1001 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-213ENST00000498495 TMEM196Q5HYL7 178 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 RHBDF2Q6PJF5 856 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 BBS7Q8IWZ6 715 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 SCUBE3Q8IX30 993 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 SYNPOQ8N3V7 929 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 IRGQQ8WZA9 623 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 GOLGA1Q92805 767 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 WBP2Q969T9 261 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 PCMTD1Q96MG8 357 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-213ENST00000498495 BPIFA3Q9BQP9 254 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 STK33Q9BYT3 514 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 MIS12Q9H081 205 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 CHRDQ9H2X0 955 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 PLCB1Q9NQ66 1216 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 OLA1Q9NTK5 396 aaKnown RBP13.42□□□□□ -0.26
HSPG2-213ENST00000498495 RBM12Q9NTZ6 932 aaKnown RBP13.42□□□□□ -0.26
HSPG2-213ENST00000498495 MARCH2Q9P0N8 246 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 STRIP2Q9ULQ0 834 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 FHOD1Q9Y613 1164 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 ZNF318Q5VUA4 2279 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 COL4A2P08572 1712 aa13.42□□□□□ -0.26
HSPG2-213ENST00000498495 PATJQ8NI35 1801 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 SLC12A8A0AV02 714 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 SYCE3A1L190 88 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 GABBR2O75899 941 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 ADH1CP00326 375 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 CYP17A1P05093 508 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 HMBSP08397 361 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 ZNF18P17022 549 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 CLCN1P35523 988 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 PLA2G5P39877 138 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 UBXN1Q04323 297 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 MTAPQ13126 283 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 LY6G5CQ5SRR4 150 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 SLC47A2Q86VL8 602 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 FAM71AQ8IYT1 594 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms