RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SNX30Q5VWJ9 437 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 TOGARAM2Q6ZUX3 1019 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 STXBP4Q6ZWJ1 553 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 RDH13Q8NBN7 331 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 WBP2Q969T9 261 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 MRGPRX1Q96LB2 322 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 CLIC6Q96NY7 704 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 GABRG3Q99928 467 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 DUSP9Q99956 384 aaKnown RBP14.77□□□□□ -0.05
CCDC58-207ENST00000498466 MED10Q9BTT4 135 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 BBS2Q9BXC9 721 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 ZDHHC5Q9C0B5 715 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 KIAA1586Q9HCI6 787 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 CD248Q9HCU0 757 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 CACNA2D2Q9NY47 1150 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 GMIPQ9P107 970 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 NXF1Q9UBU9 619 aaKnown RBP14.77□□□□□ -0.05
CCDC58-207ENST00000498466 RAXQ9Y2V3 346 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 CLIC4Q9Y696 253 aa14.77□□□□□ -0.05
CCDC58-207ENST00000498466 EIF4E1BA6NMX2 242 aaKnown RBP14.76□□□□□ -0.05
CCDC58-207ENST00000498466 MEI4A8MW99 385 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 TYRP14679 529 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 STAT6P42226 847 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 CCDC73Q6ZRK6 1079 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 TPGS1Q6ZTW0 290 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 SLCO6A1Q86UG4 719 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 CCDC65Q8IXS2 484 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 SETD7Q8WTS6 366 aaKnown RBP14.76□□□□□ -0.05
CCDC58-207ENST00000498466 PANK2Q9BZ23 570 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 PPP4R2Q9NY27 417 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 FBXO2Q9UK22 296 aaPredicted RBP14.76□□□□□ -0.05
CCDC58-207ENST00000498466 PCOLCE2Q9UKZ9 415 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 SRPRBQ9Y5M8 271 aaKnown RBP14.76□□□□□ -0.05
CCDC58-207ENST00000498466 MYOFQ9NZM1 2061 aa14.76□□□□□ -0.05
CCDC58-207ENST00000498466 A0A1B0GTW7 788 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 PRRT4C9JH25 899 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 CACNG3O60359 315 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 TLR5O60602 858 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 CLSTN1O94985 981 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 CD6P30203 668 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 TRPC3Q13507 836 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 SNRNP35Q16560 246 aaKnown RBP14.75□□□□□ -0.05
CCDC58-207ENST00000498466 GLRX5Q86SX6 157 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 FAM35AQ86V20 835 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 ZCCHC9Q8N567 271 aaKnown RBP14.75□□□□□ -0.05
CCDC58-207ENST00000498466 GLIS3Q8NEA6 775 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 CCDC127Q96BQ5 260 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 LRIG1Q96JA1 1093 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 CGRRF1Q99675 332 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 MIR1-1HGQ9H1L0 117 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 DMAP1Q9NPF5 467 aaPredicted RBP14.75□□□□□ -0.05
CCDC58-207ENST00000498466 WDR35Q9P2L0 1181 aa14.75□□□□□ -0.05
CCDC58-207ENST00000498466 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.75□□□□□ -0.05
CCDC58-207ENST00000498466 CEP192Q8TEP8 1941 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 WASH3PC4AMC7 463 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 CBFA2T3O75081 653 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 ZDHHC11BP0C7U3 371 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 DGKGP49619 791 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 MYL6P60660 151 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 GOLGA8FQ08AF8 430 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 GOLGA8DPQ0D2H9 430 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 STARD3Q14849 445 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 HTR3DQ70Z44 454 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 BHMTQ93088 406 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 HPS3Q969F9 1004 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 SMARCD1Q96GM5 515 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 TOE1Q96GM8 510 aaKnown RBP14.74□□□□□ -0.05
CCDC58-207ENST00000498466 GPR174Q9BXC1 333 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 GAREM1Q9H706 876 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 IL21RQ9HBE5 538 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.74□□□□□ -0.05
CCDC58-207ENST00000498466 COMMD8Q9NX08 183 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 IL37Q9NZH6 218 aa14.74□□□□□ -0.05
CCDC58-207ENST00000498466 LSM7Q9UK45 103 aaKnown RBP14.74□□□□□ -0.05
CCDC58-207ENST00000498466 GCN1Q92616 2671 aaKnown RBP14.74□□□□□ -0.05
CCDC58-207ENST00000498466 IGSF10Q6WRI0 2623 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 VPS37CA5D8V6 355 aaPredicted RBP14.73□□□□□ -0.05
CCDC58-207ENST00000498466 GFRA2O00451 464 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 AP1G2O75843 785 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 CD2BP2O95400 341 aaKnown RBP14.73□□□□□ -0.05
CCDC58-207ENST00000498466 CER1O95813 267 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 TBX18O95935 607 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 NCAM1P13591 858 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 CDH8P55286 799 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 CYP24A1Q07973 514 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 PSMD6Q15008 389 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 PAQR9Q6ZVX9 377 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 PIP4P2Q8N4L2 257 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 DNASE2BQ8WZ79 361 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 SYAP1Q96A49 352 aaPredicted RBP14.73□□□□□ -0.05
CCDC58-207ENST00000498466 TNIP3Q96KP6 325 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 BBC3Q96PG8 261 aaPredicted RBP14.73□□□□□ -0.05
CCDC58-207ENST00000498466 KLF16Q9BXK1 252 aaPredicted RBP14.73□□□□□ -0.05
CCDC58-207ENST00000498466 TRIM9Q9C026 710 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 SMYD3Q9H7B4 428 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 PRDM16Q9HAZ2 1276 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 SCUBE2Q9NQ36 999 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 TLR8Q9NR97 1041 aaKnown RBP14.73□□□□□ -0.05
CCDC58-207ENST00000498466 TM7SF3Q9NS93 570 aa14.73□□□□□ -0.05
CCDC58-207ENST00000498466 KRT82Q9NSB4 513 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms