RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CCDC138Q96M89 665 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 RIPOR3Q96MK2 946 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 SNX18Q96RF0 628 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 MYD88Q99836 296 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 MACROD1Q9BQ69 325 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 SELENOOQ9BVL4 669 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 CIPCQ9C0C6 399 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 SLC25A32Q9H2D1 315 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 ZBTB26Q9HCK0 441 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 SNX15Q9NRS6 342 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 ADARB2Q9NS39 739 aaKnown RBP3.41□□□□□ -1.86
RIF1-212ENST00000498041 GJB4Q9NTQ9 266 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 MGAT4CQ9UBM8 478 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 RIMKLBQ9ULI2 386 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 SLC27A6Q9Y2P4 619 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 COL15A1P39059 1388 aa3.4□□□□□ -1.86
RIF1-212ENST00000498041 A0A087WZ62 844 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 MANSC4A6NHS7 340 aaPredicted RBP3.4□□□□□ -1.87
RIF1-212ENST00000498041 LINC01548A6NM66 108 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 A8MVJ9 347 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 SPRY2O43597 315 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 NCK2O43639 380 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 TMPRSS11DO60235 418 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 COQ9O75208 318 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 FGF18O76093 207 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 HARSP12081 509 aaKnown RBP3.4□□□□□ -1.87
RIF1-212ENST00000498041 FPR3P25089 353 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 C21orf58P58505 322 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 PSG6Q00889 435 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 TFF2Q03403 129 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 LMAN2Q12907 356 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 SLC10A2Q12908 348 aaPredicted RBP3.4□□□□□ -1.87
RIF1-212ENST00000498041 PMS2P11Q13670 270 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 ST3GAL2Q16842 350 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 PROSER3Q2NL68 480 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 TMEM119Q4V9L6 283 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 RNASE12Q5GAN4 147 aaKnown RBP3.4□□□□□ -1.87
RIF1-212ENST00000498041 TMEM63BQ5T3F8 832 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 FAXCQ5TGI0 409 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 IZUMO3Q5VZ72 239 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 CRTC1Q6UUV9 634 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 KIRREL2Q6UWL6 708 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 NOL8Q76FK4 1167 aaKnown RBP3.4□□□□□ -1.87
RIF1-212ENST00000498041 KRT73Q86Y46 540 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 TXLNBQ8N3L3 684 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 FSTL5Q8N475 847 aaPredicted RBP3.4□□□□□ -1.87
RIF1-212ENST00000498041 OR2C3Q8N628 320 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 METTL25Q8N6Q8 603 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 MBD3L2Q8NHZ7 208 aaPredicted RBP3.4□□□□□ -1.87
RIF1-212ENST00000498041 WDYHV1Q96HA8 205 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 VPS50Q96JG6 964 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 SNX27Q96L92 541 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 AS3MTQ9HBK9 375 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 TMOD4Q9NZQ9 345 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 MAN2B2Q9Y2E5 1009 aa3.4□□□□□ -1.87
RIF1-212ENST00000498041 POLA1P09884 1462 aaPredicted RBP3.4□□□□□ -1.87
RIF1-212ENST00000498041 POC1B-GALNT4F8VUJ3 575 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 SMIM22K7EJ46 135 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 CCNT2O60583 730 aaKnown RBP3.39□□□□□ -1.87
RIF1-212ENST00000498041 TMEM225BP0DP42 221 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 ZNF37AP17032 561 aaPredicted RBP3.39□□□□□ -1.87
RIF1-212ENST00000498041 DIO1P49895 249 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 RENBPP51606 427 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 EIF4A1P60842 406 aaKnown RBP3.39□□□□□ -1.87
RIF1-212ENST00000498041 TUBA4AP68366 448 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 GPS1Q13098 491 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 GRM1Q13255 1194 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 C4orf46Q504U0 113 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.39□□□□□ -1.87
RIF1-212ENST00000498041 PRAMEF17Q5VTA0 474 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 MRNIPQ6NTE8 343 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 SERPINA13PQ6UXR4 307 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 KIAA0408Q6ZU52 694 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 BCDIN3DQ7Z5W3 292 aaKnown RBP3.39□□□□□ -1.87
RIF1-212ENST00000498041 SRLQ86TD4 932 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 CCDC146Q8IYE0 955 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 FAM186BQ8IYM0 893 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 GALNT4Q8N4A0 578 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 SUN3Q8TAQ9 357 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 ABHD5Q8WTS1 349 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 DPF1Q92782 380 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 ZNF566Q969W8 418 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 FYTTD1Q96QD9 318 aaKnown RBP3.39□□□□□ -1.87
RIF1-212ENST00000498041 MMS19Q96T76 1030 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 GDF15Q99988 308 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 CERS4Q9HA82 394 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 LPAR3Q9UBY5 353 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 CEP83Q9Y592 693 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 LRRIQ1Q96JM4 1722 aa3.39□□□□□ -1.87
RIF1-212ENST00000498041 SETD1BQ9UPS6 1966 aaKnown RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 PDS5BQ9NTI5 1447 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 TARBP1Q13395 1621 aaKnown RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 WIPF3A6NGB9 483 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 TISP43B9A030 160 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 PRRT4C9JH25 899 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 BTBD19C9JJ37 291 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 UBE2Q2LH0YL09 131 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 HNRNPDLO14979 420 aaKnown RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 GCATO75600 419 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms