RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 FNIP2Q9P278 1114 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 RNF14Q9UBS8 474 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 PACSIN2Q9UNF0 486 aaPredicted RBP14.86□□□□□ -0.03
VPS26A-209ENST00000497564 PCDHA3Q9Y5H8 950 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 HCFC2Q9Y5Z7 792 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 WDR27A2RRH5 827 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 C2CD2LO14523 706 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 PSTPIP1O43586 416 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 DAB1O75553 588 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 ABLIM3O94929 683 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 HAPLN1P10915 354 aaPredicted RBP14.85□□□□□ -0.03
VPS26A-209ENST00000497564 EPCAMP16422 314 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 PSMA2P25787 234 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 FLT3P36888 993 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 GRIK1P39086 918 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 PTPN9P43378 593 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 PEX5P50542 639 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 SMAD4Q13485 552 aaKnown RBP14.85□□□□□ -0.03
VPS26A-209ENST00000497564 SMAD2Q15796 467 aaKnown RBP14.85□□□□□ -0.03
VPS26A-209ENST00000497564 LRRC38Q5VT99 294 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 TRNP1Q6NT89 227 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 SYCE2Q6PIF2 218 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 RNF19BQ6ZMZ0 732 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 BEND5Q7L4P6 421 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 EMC1Q8N766 993 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 CLEC4CQ8WTT0 213 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 RXFP2Q8WXD0 754 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 CDCA3Q99618 268 aaPredicted RBP14.85□□□□□ -0.03
VPS26A-209ENST00000497564 ULBP1Q9BZM6 244 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 RXFP1Q9HBX9 757 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 COMMD8Q9NX08 183 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 IL37Q9NZH6 218 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 AFF4Q9UHB7 1163 aaKnown RBP14.85□□□□□ -0.03
VPS26A-209ENST00000497564 MAFFQ9ULX9 164 aa14.85□□□□□ -0.03
VPS26A-209ENST00000497564 KCNK3O14649 394 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
VPS26A-209ENST00000497564 ADAM12O43184 909 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 ZBED1O96006 694 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 CNPP09543 421 aaKnown RBP14.84□□□□□ -0.03
VPS26A-209ENST00000497564 PDGFRAP16234 1089 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 OR1D2P34982 312 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 PCK1P35558 622 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 ZP2Q05996 745 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 RAB33AQ14088 237 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 TAF5Q15542 800 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 ANKRD54Q6NXT1 300 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 TMEM184AQ6ZMB5 413 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 BHLHA9Q7RTU4 235 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 ZNF572Q7Z3I7 529 aaPredicted RBP14.84□□□□□ -0.03
VPS26A-209ENST00000497564 POLNQ7Z5Q5 900 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 CPNE8Q86YQ8 564 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 CREG2Q8IUH2 290 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 RHOT1Q8IXI2 618 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 ATAD1Q8NBU5 361 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 SPATA17Q96L03 361 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 SLC2A13Q96QE2 648 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 DDX23Q9BUQ8 820 aaKnown RBP14.84□□□□□ -0.03
VPS26A-209ENST00000497564 TRIM62Q9BVG3 475 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 MRPL17Q9NRX2 175 aaKnown RBP14.84□□□□□ -0.03
VPS26A-209ENST00000497564 USP15Q9Y4E8 981 aaPredicted RBP14.84□□□□□ -0.03
VPS26A-209ENST00000497564 IRAK3Q9Y616 596 aa14.84□□□□□ -0.03
VPS26A-209ENST00000497564 FAM92AA1XBS5 289 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 SRGAP2O75044 1071 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 LRCH4O75427 683 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 DESP17661 470 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 SDC4P31431 198 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 MATKP42679 507 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 SLC5A3P53794 718 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 ARPP19P56211 112 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 RNASE9P60153 205 aaKnown RBP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 RPL10AP62906 217 aaKnown RBP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 YWHAZP63104 245 aaKnown RBP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 CKAP4Q07065 602 aaKnown RBP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 PUS10Q3MIT2 529 aaKnown RBP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 CCDC14Q49A88 953 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 DCAF12L1Q5VU92 463 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 CC2D1AQ6P1N0 951 aaPredicted RBP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 SCN4BQ8IWT1 228 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 NUP93Q8N1F7 819 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 RASGEF1CQ8N431 466 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 C12orf76Q8N812 135 aaPredicted RBP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 CEP112Q8N8E3 955 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 ZNF461Q8TAF7 563 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 COG1Q8WTW3 980 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 SLC22A17Q8WUG5 538 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 CENPIQ92674 756 aaPredicted RBP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 ALG3Q92685 438 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 KRT35Q92764 455 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 NT5C3BQ969T7 300 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 PGLYRP2Q96PD5 576 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 KLHL5Q96PQ7 755 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 S1PR5Q9H228 398 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 POPDC2Q9HBU9 364 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 RRN3Q9NYV6 651 aa14.83□□□□□ -0.04
VPS26A-209ENST00000497564 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 TTC7AQ9ULT0 858 aaPredicted RBP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
VPS26A-209ENST00000497564 GRAP2O75791 330 aa14.82□□□□□ -0.04
VPS26A-209ENST00000497564 RNF8O76064 485 aa14.82□□□□□ -0.04
VPS26A-209ENST00000497564 RTN3O95197 1032 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms