RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 ARHGAP25P42331 645 aa20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 KPNA1P52294 538 aaPredicted RBP20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 IFI16Q16666 785 aaKnown RBP20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 GAREM2Q75VX8 874 aa20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 Q7L0L9 218 aa20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 GPR152Q8TDT2 470 aa20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 ZNF334Q9HCZ1 680 aaPredicted RBP20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 STAP1Q9ULZ2 295 aa20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 MAGED2Q9UNF1 606 aaPredicted RBP20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 C2CD4BA6NLJ0 364 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 TADA3O75528 432 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 ENDOD1O94919 500 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 F9P00740 461 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 OAS1P00973 400 aaKnown RBP20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 GABRR2P28476 465 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 PUS10Q3MIT2 529 aaKnown RBP20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 ARHGAP15Q53QZ3 475 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 HECTD3Q5T447 861 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 BTBD8Q5XKL5 378 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 BNIPLQ7Z465 357 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 KIAA1328Q86T90 577 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 NIPA2Q8N8Q9 360 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 SUSD6Q92537 303 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 CORO1BQ9BR76 489 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 GMIPQ9P107 970 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 CD207Q9UJ71 328 aa20.66■□□□□ 0.9
SCAMP3-209ENST00000497470 A0A1W2PQH9 124 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 FYNP06241 537 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 TCF3P15923 654 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 ABCB4P21439 1286 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 ZNF143P52747 638 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 RBM10P98175 930 aaKnown RBP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 EIF4EBP2Q13542 120 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 PIGHQ14442 188 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 SLC25A52Q3SY17 297 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 RARS2Q5T160 578 aaKnown RBP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 DCUN1D2Q6PH85 259 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 TMC5Q6UXY8 1006 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 STRADAQ7RTN6 431 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 GRASPQ7Z6J2 395 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 ACRBPQ8NEB7 543 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 CENPIQ92674 756 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 FAM149B1Q96BN6 582 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 TRIM44Q96DX7 344 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 PACSIN1Q9BY11 444 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 TASP1Q9H6P5 420 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 UBE2ZQ9H832 354 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 GDE1Q9NZC3 331 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 CHORDC1Q9UHD1 332 aaPredicted RBP20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 PPP2R2CQ9Y2T4 447 aa20.65■□□□□ 0.9
SCAMP3-209ENST00000497470 MOSPD3O75425 235 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 IGLV3-25P01717 112 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 MAN1A1P33908 653 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 RFC1P35251 1148 aaPredicted RBP20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 ATP5C1P36542 298 aaKnown RBP20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 CDR1P51861 262 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 RING1Q06587 406 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 ACBD5Q5T8D3 534 aaPredicted RBP20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 SLC35G2Q8TBE7 412 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 CLEC4CQ8WTT0 213 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 RNF139Q8WU17 664 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 HLA-CQ95604 372 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 NPY6RQ99463 290 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 CNPY3Q9BT09 278 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 NUP85Q9BW27 656 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 SMOC2Q9H3U7 446 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 NMUR1Q9HB89 426 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 IP6K2Q9UHH9 426 aa20.64■□□□□ 0.89
SCAMP3-209ENST00000497470 MYO1FO00160 1098 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 CAPN9O14815 690 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 TLR5O60602 858 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 RARGP13631 454 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 SLC7A9P82251 487 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 DLX2Q07687 328 aaPredicted RBP20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 SMAD4Q13485 552 aaKnown RBP20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 C2CD6Q53TS8 623 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 HS6ST3Q8IZP7 471 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 DEFB106AQ8N104 65 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 C12orf76Q8N812 135 aaPredicted RBP20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 SHKBP1Q8TBC3 707 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 ZNF564Q8TBZ8 553 aaPredicted RBP20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 ARHGEF26Q96DR7 871 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 PIWIL1Q96J94 861 aaKnown RBP20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 SERPINB11Q96P15 392 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 LACRTQ9GZZ8 138 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 ATXN3LQ9H3M9 355 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 METTL5Q9NRN9 209 aaKnown RBP20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 HCFC1R1Q9NWW0 138 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 CTTNBP2NLQ9P2B4 639 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 DNMT3LQ9UJW3 386 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 USTQ9Y2C2 406 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 MRPS23Q9Y3D9 190 aaKnown RBP20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 HBS1LQ9Y450 684 aaKnown RBP20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 PAXBP1Q9Y5B6 917 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 DENND4CQ5VZ89 1909 aa20.63■□□□□ 0.89
SCAMP3-209ENST00000497470 NOTCH4Q99466 2003 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 RCCD1A6NED2 376 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms