RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 CNTN6Q9UQ52 1028 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CAMK2AQ9UQM7 478 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CCL27Q9Y4X3 112 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 LYVE1Q9Y5Y7 322 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 PTPN23Q9H3S7 1636 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 RPTORQ8N122 1335 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 MYBBP1AQ9BQG0 1328 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 ATRNL1Q5VV63 1379 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ARHGAP35Q9NRY4 1499 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 MLH3Q9UHC1 1453 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 SAMD9Q5K651 1589 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 CTTNBP2Q8WZ74 1663 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 LIPT2A6NK58 231 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ZNF839A8K0R7 811 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 A8MZ25 164 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 C9orf172C9J069 976 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 PTGES3LE9PB15 166 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 CAPN9O14815 690 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 FYB1O15117 783 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 LDLRAD4O15165 306 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 CCP110O43303 1012 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ADCY6O43306 1168 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 HNRNPRO43390 633 aaKnown RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 PHF2O75151 1096 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 PPP6R2O75170 966 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 RPP40O75818 363 aaKnown RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 PIAS2O75928 621 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 KRT38O76015 456 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 CAMTA2O94983 1202 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 UNC5CO95185 931 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 METTL18O95568 372 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 APBB3O95704 486 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 EFEMP2O95967 443 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 AFPP02771 609 aaKnown RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 PROCP04070 461 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 NTRK1P04629 796 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 SLURP2P0DP57 97 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 GLI4P10075 376 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 UBL4AP11441 157 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 DESP17661 470 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 PFKLP17858 780 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 DDCP20711 480 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 SERPINA4P29622 427 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 HOXC8P31273 242 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 SLC6A4P31645 630 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ATP6V1E1P36543 226 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 MAGEA10P43363 369 aaPredicted RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 GALK1P51570 392 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 HSD17B4P51659 736 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 LIMK1P53667 647 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 RCAN1P53805 252 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 RARSP54136 660 aaKnown RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 UCP3P55916 312 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ANTXR2P58335 489 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 STARD6P59095 220 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 UBXN2AP68543 259 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 MAP2K1Q02750 393 aaPredicted RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 MVKQ03426 396 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 GRIN1Q05586 938 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 NFATC3Q12968 1075 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 MPP3Q13368 585 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 HABP2Q14520 560 aaPredicted RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 SEMA3AQ14563 771 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 KCNB1Q14721 858 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 GRM4Q14833 912 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 TYSND1Q2T9J0 566 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 C19orf54Q5BKX5 351 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 TCP11X2Q5H9J9 407 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ZNF484Q5JVG2 852 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 FAM69AQ5T7M9 428 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 DEPDC1Q5TB30 811 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ATPAF1Q5TC12 328 aaPredicted RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 CD276Q5ZPR3 534 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ADALQ6DHV7 355 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 PLAG1Q6DJT9 500 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 DGAT2L7PQ6IED9 249 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 WDR73Q6P4I2 378 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 C11orf88Q6PI97 169 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 CYP20A1Q6UW02 462 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ATF7IPQ6VMQ6 1270 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 Q6ZNB5 142 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 FAM83HQ6ZRV2 1179 aaPredicted RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 SEM1Q6ZVN7 128 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 RAPH1Q70E73 1250 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 IKBIPQ70UQ0 350 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 SYT13Q7L8C5 426 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ZNF804AQ7Z570 1209 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 RSPH3Q86UC2 560 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ALYREFQ86V81 257 aaKnown RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 NLRP14Q86W24 1093 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 AMIGO3Q86WK7 504 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 PLXDC1Q8IUK5 500 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 LINC00346Q8IVM7 164 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 SCN4BQ8IWT1 228 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 TRIM48Q8IWZ4 208 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 YAF2Q8IY57 180 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 ULK2Q8IYT8 1036 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 GPR161Q8N6U8 529 aaKnown RBP2.07□□□□□ -2.08
UBR4-217ENST00000497018 MIGA1Q8NAN2 632 aa2.07□□□□□ -2.08
UBR4-217ENST00000497018 NETO2Q8NC67 525 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms