RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PAMP19021 973 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CTNNA2P26232 953 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 GDI1P31150 447 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 THBS2P35442 1172 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 LONP1P36776 959 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 AARSP49588 968 aaKnown RBP eCLIP3.26□□□□□ -1.891e-5■■□□□ 14
SNRNP48-202ENST00000496946 ALDH5A1P51649 535 aaPredicted RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 BPIFB4P59827 614 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 GPR85P60893 370 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PLOD1Q02809 727 aaPredicted RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 SPAG1Q07617 926 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CSTF3Q12996 717 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PPFIA1Q13136 1202 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 SCARB2Q14108 478 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 DOC2AQ14183 400 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT32Q14532 448 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CASP8Q14790 479 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 TCTE1Q5JU00 501 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ZNF362Q5T0B9 420 aaPredicted RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 SYDE2Q5VT97 1194 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CEP85Q6P2H3 762 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CYB5D1Q6P9G0 228 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 TMEM154Q6P9G4 183 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 AKAP14Q86UN6 197 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM124AQ86V42 546 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 HEATR4Q86WZ0 1026 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 STX12Q86Y82 276 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 NOSTRINQ8IVI9 506 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 REXO1L1PQ8IX06 675 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 LRRC56Q8IYG6 542 aaPredicted RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 HACE1Q8IYU2 909 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 TRMT2AQ8IZ69 625 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ST13P4Q8IZP2 240 aaPredicted RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ZBTB44Q8NCP5 570 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ZSWIM2Q8NEG5 633 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PIP4K2CQ8TBX8 421 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 BCAS4Q8TDM0 211 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC9A6Q92581 669 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 HDAC11Q96DB2 347 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ZNF845Q96IR2 970 aaPredicted RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 TSNARE1Q96NA8 513 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 NOX5Q96PH1 765 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ASB2Q96Q27 587 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PIGSQ96S52 555 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 TCF25Q9BQ70 676 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 SELENOSQ9BQE4 189 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 LLPHQ9BRT6 129 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ERP44Q9BS26 406 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 DHRS4Q9BTZ2 278 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CENPHQ9H3R5 247 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 DCTPP1Q9H773 170 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 IFT22Q9H7X7 185 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 LY9Q9HBG7 655 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 POLE3Q9NRF9 147 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 TRMT13Q9NUP7 481 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 DACT1Q9NYF0 836 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 TNFRSF10DQ9UBN6 386 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PCDHGB5Q9Y5G0 923 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 FADS3Q9Y5Q0 445 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 AP1M2Q9Y6Q5 423 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ADAMTS20P59510 1910 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 TTC41PQ6P2S7 1318 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 WDR19Q8NEZ3 1342 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ATXN2Q99700 1313 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 NSD2O96028 1365 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ZSCAN5CA6NGD5 496 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GOLGA8RI6L899 631 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 L7N2F9 121 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 NKRFO15226 690 aaKnown RBP eCLIP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GPR39O43194 453 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 THAP12O43422 761 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 BUB1BO60566 1050 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 KLHL2O95198 593 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 LUC7L3O95232 432 aaKnown RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 TRIM16O95361 564 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 TBX18O95935 607 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 OPN1MWP04001 364 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ITGB3P05106 788 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ASGR1P07306 291 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ASGR2P07307 311 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GSTT2P0CG29 244 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GSTT2BP0CG30 244 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 OPN1MW2P0DN77 364 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 OPN1MW3P0DN78 364 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PRKAR1AP10644 381 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CYP2A6P11509 494 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PORP16435 677 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ATP5F1P24539 256 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CNTFP26441 200 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 TKTP29401 623 aaKnown RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SERPINB6P35237 376 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT2P35908 639 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GRK6P43250 576 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 KIR2DL1P43626 348 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 KIR2DL2P43627 348 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 HSPA13P48723 471 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SCNN1GP51170 649 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CCR3P51677 355 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 GSDMDP57764 484 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC26A5P58743 744 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms