RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 PRMT3O60678 531 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 ZNF254O75437 659 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 ITGB3P05106 788 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 CTSHP09668 335 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TMEM191BP0C7N4 346 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 ZNF16P17020 682 aaPredicted RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 ACO1P21399 889 aaKnown RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 PROZP22891 400 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 MSX1P28360 303 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 HOXA11P31270 313 aaPredicted RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 S100A5P33763 92 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 PDE6CP51160 858 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 SEC13P55735 322 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TUBA1BP68363 451 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 CUL2Q13617 745 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 GAS6Q14393 721 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 WHAMMP3Q1A5X7 153 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 SLC10A6Q3KNW5 377 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 DCAF12L1Q5VU92 463 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 IQSEC1Q6DN90 963 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TUBA1AQ71U36 451 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 LRRC43Q8N309 656 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 RNF10Q8N5U6 811 aaKnown RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 C1orf127Q8N9H9 656 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 LRRC45Q96CN5 670 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 DTNBP1Q96EV8 351 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 NR1H4Q96RI1 486 aaPredicted RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 LPIN3Q9BQK8 851 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 GOLGA2P5Q9HBQ8 144 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 LUC7LQ9NQ29 371 aaKnown RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 CASS4Q9NQ75 786 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 BATF3Q9NR55 127 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 NDFIP2Q9NV92 336 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 GALNT8Q9NY28 637 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 SIX4Q9UIU6 781 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 RIMKLBQ9ULI2 386 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TMA7Q9Y2S6 64 aaKnown RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TMED5Q9Y3A6 229 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 WDR81Q562E7 1941 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 C5orf42Q9H799 3197 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 ANO9A1A5B4 782 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 C2orf81A6NN90 581 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TSPAN1O60635 241 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TRPA1O75762 1119 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 CYP2C9P11712 490 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TMOD1P28289 359 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 PHEXP78562 749 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 RPS6KA1Q15418 735 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 DUOXA2Q1HG44 320 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 FAM47CQ5HY64 1035 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TMEM164Q5U3C3 297 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 USP37Q86T82 979 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 NT5DC3Q86UY8 548 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 LINC01465Q8N7H1 131 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 GTF3C2Q8WUA4 911 aaPredicted RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TFAP2BQ92481 460 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 SLC39A13Q96H72 371 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 C8orf48Q96LL4 319 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TWNKQ96RR1 684 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 CGRRF1Q99675 332 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 C11orf70Q9BRQ4 267 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 DDX47Q9H0S4 455 aaKnown RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 XYLT2Q9H1B5 865 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 NXF3Q9H4D5 531 aaKnown RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 ZFYVE28Q9HCC9 887 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 SNTG2Q9NY99 539 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 DKK3Q9UBP4 350 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 PHF24Q9UPV7 400 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 ALG6Q9Y672 507 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TCRBV7S2A1N4TA0A589 114 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 DCDC2BA2VCK2 349 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 TMEM247A6NEH6 219 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 LRRC72A6NJI9 287 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 THAP12O43422 761 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 LZTS3O60299 673 aaPredicted RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 F2P00734 622 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 ASS1P00966 412 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 GLI1P08151 1106 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 CLTAP09496 248 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 GNAT1P11488 350 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 MCM3P25205 808 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 GNA15P30679 374 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 GBP2P32456 591 aaPredicted RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 GTF2H1P32780 548 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 CDR2Q01850 454 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 GCNT1Q02742 428 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 PPARDQ03181 441 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 TRPC3Q13507 836 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 ITGA7Q13683 1181 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 TFDP1Q14186 410 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 CCDC142Q17RM4 750 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 BOLA3Q53S33 107 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 ZNF484Q5JVG2 852 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 SDE2Q6IQ49 451 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 CATSPER4Q7RTX7 472 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 SESTD1Q86VW0 696 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 C12orf29Q8N999 325 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 RBBP8NLQ8NC74 664 aaPredicted RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 RFFLQ8WZ73 363 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 C18orf25Q96B23 403 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms