RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 SPTLC1O15269 473 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 AMPD1P23109 780 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 CYP2F1P24903 491 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 GABRB2P47870 512 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 PITX1P78337 314 aaPredicted RBP12□□□□□ -0.49
CDCA7-208ENST00000496441 SLC6A3Q01959 620 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 ACVR2BQ13705 512 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 TFDP2Q14188 446 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 DGKDQ16760 1214 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 EFHC2Q5JST6 749 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 MPP5Q8N3R9 675 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 NPLOC4Q8TAT6 608 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 DCAKDQ8WVC6 231 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 LRRC37BQ96QE4 947 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 RXFP1Q9HBX9 757 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 ZC3H7BQ9UGR2 993 aaKnown RBP12□□□□□ -0.49
CDCA7-208ENST00000496441 CPA4Q9UI42 421 aa12□□□□□ -0.49
CDCA7-208ENST00000496441 TIMM13Q9Y5L4 95 aaPredicted RBP12□□□□□ -0.49
CDCA7-208ENST00000496441 CREB3O43889 395 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 TYROBPO43914 113 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 NQO1P15559 274 aaKnown RBP11.99□□□□□ -0.49
CDCA7-208ENST00000496441 SLC10A2Q12908 348 aaPredicted RBP11.99□□□□□ -0.49
CDCA7-208ENST00000496441 NME3Q13232 169 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 SETDB1Q15047 1291 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 BRI3BPQ8WY22 251 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 CYTH2Q99418 400 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 LGMNQ99538 433 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 CHKBQ9Y259 395 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 C2CD2Q9Y426 696 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 CHUKO15111 745 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 METTL18O95568 372 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 KITP10721 976 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 GOT1P17174 413 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 YY1P25490 414 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 PCK1P35558 622 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 GNL1P36915 607 aaPredicted RBP11.99□□□□□ -0.49
CDCA7-208ENST00000496441 ERFP50548 548 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 INCA1Q0VD86 236 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 BNIP1Q12981 228 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 NR1H3Q13133 447 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 HIC1Q14526 733 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 PDK4Q16654 411 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 FAM187BQ17R55 369 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 MROH9Q5TGP6 573 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 DENND5BQ6ZUT9 1274 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 MTDHQ86UE4 582 aaKnown RBP11.99□□□□□ -0.49
CDCA7-208ENST00000496441 RFWD2Q8NHY2 731 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 KHSRPQ92945 711 aaKnown RBP eCLIP11.99□□□□□ -0.493e-6■■■■□ 20.1
CDCA7-208ENST00000496441 MAML3Q96JK9 1138 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 ZFP42Q96MM3 310 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 SYT17Q9BSW7 474 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 NFKBIZQ9BYH8 718 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 GCOM2Q9BZD3 368 aaPredicted RBP11.99□□□□□ -0.49
CDCA7-208ENST00000496441 MAF1Q9H063 256 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 IQCGQ9H095 443 aaKnown RBP11.99□□□□□ -0.49
CDCA7-208ENST00000496441 USP29Q9HBJ7 922 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 SPON1Q9HCB6 807 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 VTA1Q9NP79 307 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 PRKAG3Q9UGI9 489 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 SLC24A2Q9UI40 661 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 SMG5Q9UPR3 1016 aaKnown RBP11.99□□□□□ -0.49
CDCA7-208ENST00000496441 ACTL7BQ9Y614 415 aa11.99□□□□□ -0.49
CDCA7-208ENST00000496441 TRIM49D1C9J1S8 452 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 TREHO43280 583 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 BGNP21810 368 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 STIP1P31948 543 aaKnown RBP11.98□□□□□ -0.49
CDCA7-208ENST00000496441 NDUFV1P49821 464 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 KLHL38Q2WGJ6 581 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 PLEKHG4Q58EX7 1191 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 DCAF6Q58WW2 860 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 SLC27A1Q6PCB7 646 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 TRMT10BQ6PF06 316 aaKnown RBP11.98□□□□□ -0.49
CDCA7-208ENST00000496441 ADGRD1Q6QNK2 874 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 KIRREL3Q8IZU9 778 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 LINC01465Q8N7H1 131 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 CCNYQ8ND76 341 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 TINF2Q9BSI4 451 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 ZNF395Q9H8N7 513 aaPredicted RBP11.98□□□□□ -0.49
CDCA7-208ENST00000496441 MARCOQ9UEW3 520 aaPredicted RBP11.98□□□□□ -0.49
CDCA7-208ENST00000496441 BPTFQ12830 3046 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 PLXNA1Q9UIW2 1896 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 MEIS3P2A8K0S8 358 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 PRPF4O43172 522 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDCA7-208ENST00000496441 SMIM10L2AP0DMW4 78 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 SMIM10L2BP0DMW5 78 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 GRM5P41594 1212 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 YWHAZP63104 245 aaKnown RBP11.98□□□□□ -0.49
CDCA7-208ENST00000496441 SOX4Q06945 474 aaPredicted RBP11.98□□□□□ -0.49
CDCA7-208ENST00000496441 OLIG2Q13516 323 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 ACCSLQ4AC99 568 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 KCNT2Q6UVM3 1135 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 CDHR3Q6ZTQ4 885 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 CCDC125Q86Z20 511 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 NME8Q8N427 588 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 BEST2Q8NFU1 509 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 SLC35F5Q8WV83 523 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 SNX25Q9H3E2 840 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 AP4E1Q9UPM8 1137 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 EFR3BQ9Y2G0 817 aa11.98□□□□□ -0.49
CDCA7-208ENST00000496441 NUP205Q92621 2012 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms