RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	SOX5	P35711	763 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	PSEN1	P49768	467 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	TUB	P50607	506 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	VCP	P55072	806 aa	Known RBP	10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	DAOA	P59103	153 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	BPIFB4	P59827	614 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	ITPRIPL2	Q3MIP1	535 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	BSPRY	Q5W0U4	402 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	PM20D1	Q6GTS8	502 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	BHLHA9	Q7RTU4	235 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	CACNA2D4	Q7Z3S7	1137 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	BMP8A	Q7Z5Y6	402 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	NOP9	Q86U38	636 aa	Known RBP	10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	SCUBE3	Q8IX30	993 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	ARHGAP18	Q8N392	663 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	C1orf131	Q8NDD1	294 aa	Known RBP	10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	FAM83C	Q9BQN1	747 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	CYLD	Q9NQC7	956 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	HPS4	Q9NQG7	708 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	CNGB3	Q9NQW8	809 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	TJP2	Q9UDY2	1190 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	DNMT3L	Q9UJW3	386 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	NDRG2	Q9UN36	371 aa	Known RBP	10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	SH3BP1	Q9Y3L3	701 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024	ZNF318	Q5VUA4	2279 aa		10.31	□□□□□ -0.76
CALD1-223	ENST00000496024		A0A1B0GTH6	734 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	OTOL1	A6NHN0	477 aa	Predicted RBP	10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	FAM170B	A6NMN3	283 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024		E5RJQ4	531 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	PI15	O43692	258 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	DCN	P07585	359 aa	Known RBP	10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	MME	P08473	750 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	CYP11B1	P15538	503 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	STAT1	P42224	750 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	ACADSB	P45954	432 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	UBASH3A	P57075	661 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	PRKCQ	Q04759	706 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	PDCL	Q13371	301 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	RUNX3	Q13761	415 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	NR1I3	Q14994	352 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	PDGFRL	Q15198	375 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	CWF19L1	Q69YN2	538 aa	Known RBP	10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	ASTL	Q6HA08	431 aa	Predicted RBP	10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	ZNF852	Q6ZMS4	543 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	TADA2B	Q86TJ2	420 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	WDTC1	Q8N5D0	677 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	RNF139	Q8WU17	664 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	SLC20A1	Q8WUM9	679 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	OSCP1	Q8WVF1	389 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	GOLGA1	Q92805	767 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	FAM149B1	Q96BN6	582 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	PPP1R13B	Q96KQ4	1090 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	ZFR	Q96KR1	1074 aa	Known RBP	10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	HSFY1	Q96LI6	401 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	KLF16	Q9BXK1	252 aa	Predicted RBP	10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	SLC4A5	Q9BY07	1137 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	TRPV5	Q9NQA5	729 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	CLIC5	Q9NZA1	410 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	MARCH2	Q9P0N8	246 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	IFNK	Q9P0W0	207 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	RAPGEFL1	Q9UHV5	662 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	PCDHGC3	Q9UN70	934 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	MTF2	Q9Y483	593 aa	Predicted RBP	10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	CEP83	Q9Y592	693 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	MIA3	Q5JRA6	1907 aa		10.3	□□□□□ -0.76
CALD1-223	ENST00000496024	KANSL1L	A0AUZ9	987 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	SLC12A8	A0AV02	714 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	SPECC1L-ADORA2A	F8WAN1	911 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	FBXO21	O94952	628 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	LTF	P02788	710 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	AOC1	P19801	751 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	TARS	P26639	723 aa	Known RBP	10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	AVPR2	P30518	371 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	JAM2	P57087	298 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	STARD6	P59095	220 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	GOLGA8F	Q08AF8	430 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	GOLGA8DP	Q0D2H9	430 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	MEA1	Q16626	185 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	EML3	Q32P44	896 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	OR6B2	Q6IFH4	312 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	TXNDC11	Q6PKC3	985 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	BBS7	Q8IWZ6	715 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	CPA6	Q8N4T0	437 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	TMEM105	Q8N8V8	129 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	EPS8L1	Q8TE68	723 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	STK32A	Q8WU08	396 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	FAM3C	Q92520	227 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	ATP2A3	Q93084	1043 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	NOX5	Q96PH1	765 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	CPXM1	Q96SM3	734 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	LHX5	Q9H2C1	402 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	SYNC	Q9H7C4	482 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	ECT2	Q9H8V3	914 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	SFMBT1	Q9UHJ3	866 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	LSM7	Q9UK45	103 aa	Known RBP	10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	STRIP2	Q9ULQ0	834 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	SIT1	Q9Y3P8	196 aa		10.29	□□□□□ -0.76
CALD1-223	ENST00000496024	COL4A2	P08572	1712 aa		10.29	□□□□□ -0.76

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