RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 FAM155BO75949 473 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 PPP3CBP16298 524 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 CD53P19397 219 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 BMP5P22003 454 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 CST5P28325 142 aaPredicted RBP6.75□□□□□ -1.33
CCDC39-207ENST00000495817 UQCRC1P31930 480 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 MAPK9P45984 424 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 GATMP50440 423 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 RALBP1Q15311 655 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 STRIP1Q5VSL9 837 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 NRSN1Q8IZ57 195 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 ABRAQ8N0Z2 381 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 SPPL3Q8TCT6 385 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 GRAMD1AQ96CP6 724 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 FBXL20Q96IG2 436 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 UBXN10Q96LJ8 280 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 HIST1H2AAQ96QV6 131 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 DDX23Q9BUQ8 820 aaKnown RBP6.75□□□□□ -1.33
CCDC39-207ENST00000495817 ALG8Q9BVK2 526 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 SYNPO2LQ9H987 977 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 FOXJ2Q9P0K8 574 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 ZNHIT2Q9UHR6 403 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 SERTAD3Q9UJW9 196 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 GJD2Q9UKL4 321 aa6.75□□□□□ -1.33
CCDC39-207ENST00000495817 COL15A1P39059 1388 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 FCHO1O14526 889 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 SNX2O60749 519 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 PPFIA2O75334 1257 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 ACTL6BO94805 426 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 ANXA6P08133 673 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 SRGAP2BP0DMP2 458 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 AP2B1P63010 937 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 SIM1P81133 766 aaPredicted RBP6.74□□□□□ -1.33
CCDC39-207ENST00000495817 EFR3AQ14156 821 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 TAF5Q15542 800 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 FBXO47Q5MNV8 452 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 TEDDM1Q5T9Z0 273 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 LVRNQ6Q4G3 990 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 PRIMA1Q86XR5 153 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 CCDC117Q8IWD4 279 aaPredicted RBP6.74□□□□□ -1.33
CCDC39-207ENST00000495817 SIMC1Q8NDZ2 872 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 TOR1AIP2Q8NFQ8 470 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 TMEM171Q8WVE6 324 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 OSCP1Q8WVF1 389 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 RTKNQ9BST9 563 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 DUSP26Q9BV47 211 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 INO80BQ9C086 356 aaPredicted RBP6.74□□□□□ -1.33
CCDC39-207ENST00000495817 PABPC3Q9H361 631 aaKnown RBP6.74□□□□□ -1.33
CCDC39-207ENST00000495817 RIOX1Q9H6W3 641 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 PRDM8Q9NQV8 689 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 KIF17Q9P2E2 1029 aa6.74□□□□□ -1.33
CCDC39-207ENST00000495817 SRP68Q9UHB9 627 aaKnown RBP6.74□□□□□ -1.33
CCDC39-207ENST00000495817 ADM5C9JUS6 153 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 NCAM2O15394 837 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 DHHO43323 396 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 DNPH1O43598 174 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 USP1O94782 785 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 HGFP14210 728 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 RBL1P28749 1068 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 RARRES1P49788 294 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 PNLIPRP1P54315 467 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 CLCA4Q14CN2 919 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 TIGD6Q17RP2 521 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 ATPAF1Q5TC12 328 aaPredicted RBP6.73□□□□□ -1.33
CCDC39-207ENST00000495817 DTX2Q86UW9 622 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 MOGAT3Q86VF5 341 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 SLC44A2Q8IWA5 706 aaPredicted RBP6.73□□□□□ -1.33
CCDC39-207ENST00000495817 SUGP1Q8IWZ8 645 aaKnown RBP6.73□□□□□ -1.33
CCDC39-207ENST00000495817 IZUMO1Q8IYV9 350 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 IL17REQ8NFR9 667 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 ATRIPQ8WXE1 791 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 ATG4AQ8WYN0 398 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 RUBCNQ92622 972 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 SDCCAG3Q96C92 435 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 WDR24Q96S15 920 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 ACTRT3Q9BYD9 372 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 TPSD1Q9BZJ3 242 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 TRIM36Q9NQ86 728 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 KLC4Q9NSK0 619 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 RRN3Q9NYV6 651 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 PDP2Q9P2J9 529 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 TLK1Q9UKI8 766 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 SNX14Q9Y5W7 946 aa6.73□□□□□ -1.33
CCDC39-207ENST00000495817 WDR27A2RRH5 827 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 KIAA0355O15063 1070 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 ZSCAN9O15535 394 aaPredicted RBP6.72□□□□□ -1.33
CCDC39-207ENST00000495817 NUDT3O95989 172 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 ADORA2AP29274 412 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 CACNA2D1P54289 1103 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 TIRAPP58753 221 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 TXNRD1Q16881 649 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 ADCK5Q3MIX3 580 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 TRIM60Q495X7 471 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 KAZNQ674X7 775 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 GRASPQ7Z6J2 395 aaPredicted RBP6.72□□□□□ -1.33
CCDC39-207ENST00000495817 TTC30AQ86WT1 665 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 TEX19Q8NA77 164 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 OR1N1Q8NGS0 311 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 SUN3Q8TAQ9 357 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 WDR60Q8WVS4 1066 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms