RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 UTP4Q969X6 686 aaKnown RBP10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 KREMEN1Q96MU8 473 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 GUCD1Q96NT3 240 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 TMEM209Q96SK2 561 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CEP41Q9BYV8 373 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 TRIM5Q9C035 493 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 GANQ9H2C0 597 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 HMGXB4Q9UGU5 601 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 DPP7Q9UHL4 492 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 NME7Q9Y5B8 376 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PCDHB4Q9Y5E5 795 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 FHOD1Q9Y613 1164 aa10.74□□□□□ -0.69
RAB11FIP3-211ENST00000495663 MYO7AQ13402 2215 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PRRC2BQ5JSZ5 2229 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 KRTAP9-6A0A140TA67 174 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 TGM5O43548 720 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ATP2C2O75185 946 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 NOL4O94818 638 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ABLIM3O94929 683 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 KRT5P13647 590 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ATF2P15336 505 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PTPN1P18031 435 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ACO1P21399 889 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PBX1P40424 430 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 POLR2FP61218 127 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PSMC1P62191 440 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 HYAL1Q12794 435 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PTPN21Q16825 1174 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ZNF394Q53GI3 561 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 FAM171BQ6P995 826 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 TMEM270Q6UE05 265 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 C4orf50Q6ZRC1 276 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CACNA2D4Q7Z3S7 1137 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ACOT1Q86TX2 421 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CRYBG2Q8N1P7 616 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 MYCBPAPQ8TBZ2 947 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 C2orf15Q8WU43 125 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 TMEM176AQ96HP8 235 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 TWNKQ96RR1 684 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 NUP58Q9BVL2 599 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 NAA15Q9BXJ9 866 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 DPEP3Q9H4B8 488 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 AFF4Q9UHB7 1163 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SALL4Q9UJQ4 1053 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 GTF3C4Q9UKN8 822 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 MAFFQ9ULX9 164 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 HCFC2Q9Y5Z7 792 aa10.73□□□□□ -0.69
RAB11FIP3-211ENST00000495663 MYBPHLA2RUH7 354 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 MTMR11A4FU01 709 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 H3BRJ5 948 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 EPHB6O15197 1021 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 NCK2O43639 380 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 IGLV1-40P01703 118 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PAEPP09466 180 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SRGAP2BP0DMP2 458 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ELF1P32519 619 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 USP8P40818 1118 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 EIF1AXP47813 144 aaKnown RBP10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 RAD23BP54727 409 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CYP27A1Q02318 531 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ADCY1Q08828 1119 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ORC1Q13415 861 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 DRAP1Q14919 205 aaPredicted RBP10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 FIGNQ5HY92 759 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 MDH1BQ5I0G3 518 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 LIN9Q5TKA1 542 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 LILRA6Q6PI73 481 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 LRRTM3Q86VH5 581 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SPATA2LQ8IUW3 424 aaPredicted RBP10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 EFHBQ8N7U6 833 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SLC4A11Q8NBS3 891 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 RBBP8NLQ8NC74 664 aaPredicted RBP10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SPPL2BQ8TCT7 592 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SLC22A17Q8WUG5 538 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 HDAC7Q8WUI4 952 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SHC3Q92529 594 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CASP10Q92851 521 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 IQCDQ96DY2 449 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 FUBP3Q96I24 572 aaKnown RBP eCLIP10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PGLYRP2Q96PD5 576 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SPAG5Q96R06 1193 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PKMYT1Q99640 499 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 STK33Q9BYT3 514 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ELOVL4Q9GZR5 314 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ADAM19Q9H013 955 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PLEKHA4Q9H4M7 779 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 NLRC4Q9NPP4 1024 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CRTAC1Q9NQ79 661 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CEP72Q9P209 647 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 FBXW11Q9UKB1 542 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 AJAP1Q9UKB5 411 aaPredicted RBP10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CNTN6Q9UQ52 1028 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PCDHB5Q9Y5E4 795 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ITIH6Q6UXX5 1313 aa10.72□□□□□ -0.69
RAB11FIP3-211ENST00000495663 F8VZ95 297 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 AP5Z1O43299 807 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ATP8B3O60423 1300 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 TGFB1P01137 390 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SPATA31D3P0C874 917 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 VDRP11473 427 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms