RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	WDR5B	Q86VZ2	330 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	LONP2	Q86WA8	852 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	ETFBKMT	Q8IXQ9	262 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	PHTF2	Q8N3S3	785 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	EHBP1	Q8NDI1	1231 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	KCNV2	Q8TDN2	545 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	ACD	Q96AP0	544 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	FAM81B	Q96LP2	452 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	MED15	Q96RN5	788 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	SMPD4	Q9NXE4	827 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	MARK1	Q9P0L2	795 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	DNMT3L	Q9UJW3	386 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	TSPAN16	Q9UKR8	245 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891	SPTBN4	Q9H254	2564 aa		10.82	□□□□□ -0.68
NEPRO-222	ENST00000494891		A0A1W2PQH9	124 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891		K7EQS6	105 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	RNF40	O75150	1001 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	ZBED1	O96006	694 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	RALA	P11233	206 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	RARG	P13631	454 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	ERCC5	P28715	1186 aa	Predicted RBP	10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	RPL34	P49207	117 aa	Known RBP	10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	GAD2	Q05329	585 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	CNGA2	Q16280	664 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	CAMK4	Q16566	473 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	PKN3	Q6P5Z2	889 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	ENOSF1	Q7L5Y1	443 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	BHLHA9	Q7RTU4	235 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	IRF2BP1	Q8IU81	584 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	GPR161	Q8N6U8	529 aa	Known RBP	10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	SLC35F5	Q8WV83	523 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	SPHK2	Q9NRA0	654 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	C2orf42	Q9NWW7	574 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	HESX1	Q9UBX0	185 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	EBF1	Q9UH73	591 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	ZNF510	Q9Y2H8	683 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	SH3BP1	Q9Y3L3	701 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	DCHS1	Q96JQ0	3298 aa		10.81	□□□□□ -0.68
NEPRO-222	ENST00000494891	MYOF	Q9NZM1	2061 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	LRP3	O75074	770 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	TBX18	O95935	607 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	ADH5	P11766	374 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	GRIA2	P42262	883 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	TNFRSF4	P43489	277 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	TKTL1	P51854	596 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	STX17	P56962	302 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	MRPS21	P82921	87 aa	Known RBP	10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	COG7	P83436	770 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	PDE4C	Q08493	712 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	LY6G5C	Q5SRR4	150 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	NAIF1	Q69YI7	327 aa	Predicted RBP	10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	LAIR1	Q6GTX8	287 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	TMEM270	Q6UE05	265 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	BBS7	Q8IWZ6	715 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	PPM1K	Q8N3J5	372 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	USP33	Q8TEY7	942 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	IRGQ	Q8WZA9	623 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	HSFY1	Q96LI6	401 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	PNKP	Q96T60	521 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	NACA2	Q9H009	215 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	THAP9	Q9H5L6	903 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	CNGB3	Q9NQW8	809 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	OLA1	Q9NTK5	396 aa	Known RBP	10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	LMBRD1	Q9NUN5	540 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	NAGPA	Q9UK23	515 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	LSM7	Q9UK45	103 aa	Known RBP	10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	SMG5	Q9UPR3	1016 aa	Known RBP	10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	STARD13	Q9Y3M8	1113 aa		10.8	□□□□□ -0.68
NEPRO-222	ENST00000494891	RNF225	M0QZC1	329 aa	Predicted RBP	10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	HR	O43593	1189 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	CACNG3	O60359	315 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	STC2	O76061	302 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	KAT7	O95251	611 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	KIR2DL1	P43626	348 aa	Predicted RBP	10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	YWHAG	P61981	247 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	LRMP	Q12912	555 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	GOLGA7B	Q2TAP0	167 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	C10orf120	Q5SQS8	335 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	TRIM65	Q6PJ69	517 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	RBM43	Q6ZSC3	357 aa	Known RBP	10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	ARHGEF19	Q8IW93	802 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	FAM217A	Q8IXS0	508 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	RPLP0P6	Q8NHW5	317 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	STK32A	Q8WU08	396 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	TFAP2B	Q92481	460 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	SECISBP2L	Q93073	1101 aa	Known RBP	10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	WBP2	Q969T9	261 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	CNOT6L	Q96LI5	555 aa	Known RBP	10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	KREMEN1	Q96MU8	473 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	ZSWIM1	Q9BR11	485 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	IRX2	Q9BZI1	471 aa	Predicted RBP	10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	DCLK3	Q9C098	648 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	INTS2	Q9H0H0	1204 aa	Known RBP	10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	WDR35	Q9P2L0	1181 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	DACH1	Q9UI36	760 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	STOML2	Q9UJZ1	356 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	FBXO10	Q9UK96	956 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	MMP17	Q9ULZ9	603 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms