RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 IZUMO1Q8IYV9 350 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 FKBP10Q96AY3 582 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 PRPF18Q99633 342 aaKnown RBP5.21□□□□□ -1.58
SMC4-224ENST00000494612 TRIM5Q9C035 493 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 GLOD4Q9HC38 313 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 GRHPRQ9UBQ7 328 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 CAPN11Q9UMQ6 739 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.21□□□□□ -1.58
SMC4-224ENST00000494612 ENTPD2Q9Y5L3 495 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 ADGRA2Q96PE1 1338 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 A1L4Q6 167 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 PROM1O43490 865 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 SKAP2O75563 359 aaPredicted RBP5.2□□□□□ -1.58
SMC4-224ENST00000494612 CSTBP04080 98 aaKnown RBP5.2□□□□□ -1.58
SMC4-224ENST00000494612 SRGNP10124 158 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 NR2F6P10588 404 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 BLMHQ13867 455 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 ZRSR2Q15696 482 aaKnown RBP5.2□□□□□ -1.58
SMC4-224ENST00000494612 PDCD2Q16342 344 aaPredicted RBP5.2□□□□□ -1.58
SMC4-224ENST00000494612 CERCAMQ5T4B2 595 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 DPY19L3Q6ZPD9 716 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
SMC4-224ENST00000494612 DPF1Q92782 380 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 GRAMD1AQ96CP6 724 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 ZNF778Q96MU6 729 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 HAPLN3Q96S86 360 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 EIF2AQ9BY44 585 aaKnown RBP5.2□□□□□ -1.58
SMC4-224ENST00000494612 TM7SF3Q9NS93 570 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 USP22Q9UPT9 525 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 PCDHGB3Q9Y5G1 929 aa5.2□□□□□ -1.58
SMC4-224ENST00000494612 ARHGEF17Q96PE2 2063 aaPredicted RBP5.2□□□□□ -1.58
SMC4-224ENST00000494612 FER1L4A9Z1Z3 1794 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 hCG_1642624A0A1W2PR95 340 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 GOLGA6L3A6NEY3 463 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 NPC1O15118 1278 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 MPPED1O15442 326 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 ZSCAN9O15535 394 aaPredicted RBP5.19□□□□□ -1.58
SMC4-224ENST00000494612 KCNQ3O43525 872 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 ASNA1O43681 348 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 CCNT2O60583 730 aaKnown RBP5.19□□□□□ -1.58
SMC4-224ENST00000494612 ELFN1P0C7U0 828 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 GYS1P13807 737 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 EGR1P18146 543 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 BCAT1P54687 386 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 ITIH3Q06033 890 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 GPS1Q13098 491 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 SPARCL1Q14515 664 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 MAPKAPK3Q16644 382 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 TIGD6Q17RP2 521 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 ZACNQ401N2 412 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 INO80DQ53TQ3 878 aaPredicted RBP5.19□□□□□ -1.58
SMC4-224ENST00000494612 AKNAD1Q5T1N1 836 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 GRASPQ7Z6J2 395 aaPredicted RBP5.19□□□□□ -1.58
SMC4-224ENST00000494612 CAND1Q86VP6 1230 aaKnown RBP5.19□□□□□ -1.58
SMC4-224ENST00000494612 FSTL5Q8N475 847 aaPredicted RBP5.19□□□□□ -1.58
SMC4-224ENST00000494612 CYP2W1Q8TAV3 490 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 SARAFQ96BY9 339 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 DPCDQ9BVM2 203 aaPredicted RBP5.19□□□□□ -1.58
SMC4-224ENST00000494612 SORBS1Q9BX66 1292 aaKnown RBP5.19□□□□□ -1.58
SMC4-224ENST00000494612 FAM83DQ9H4H8 585 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 ZBTB26Q9HCK0 441 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 TMOD4Q9NZQ9 345 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 DNAJB11Q9UBS4 358 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 ST3GAL5Q9UNP4 418 aa5.19□□□□□ -1.58
SMC4-224ENST00000494612 DRG1Q9Y295 367 aaKnown RBP5.19□□□□□ -1.58
SMC4-224ENST00000494612 SETD1BQ9UPS6 1966 aaKnown RBP5.18□□□□□ -1.58
SMC4-224ENST00000494612 SLC16A3O15427 465 aaKnown RBP5.18□□□□□ -1.58
SMC4-224ENST00000494612 SNX2O60749 519 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 ARP10275 920 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 PPM1FP49593 454 aaPredicted RBP5.18□□□□□ -1.58
SMC4-224ENST00000494612 MTHFSP49914 203 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 NXPH1P58417 271 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 FHL3Q13643 280 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 KAZNQ674X7 775 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 DTX2Q86UW9 622 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 METTL25Q8N6Q8 603 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 PGBD1Q96JS3 809 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 FAM227BQ96M60 508 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 RMDN3Q96TC7 470 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 HERPUD2Q9BSE4 406 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 DACT1Q9NYF0 836 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 LPAR3Q9UBY5 353 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 SLC27A6Q9Y2P4 619 aa5.18□□□□□ -1.58
SMC4-224ENST00000494612 CCDC151A5D8V7 595 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 AP4M1O00189 453 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 EXOC5O00471 708 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 ACKR2O00590 384 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 FCHO1O14526 889 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 TLR5O60602 858 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 CELA2AP08217 269 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 IL6RP08887 468 aaPredicted RBP5.17□□□□□ -1.58
SMC4-224ENST00000494612 ZFXP17010 805 aaPredicted RBP5.17□□□□□ -1.58
SMC4-224ENST00000494612 MST1P26927 711 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 ITPKBP27987 946 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 EPHA3P29320 983 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 GRIA3P42263 894 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 KRT72Q14CN4 511 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 TXNRD1Q16881 649 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 SLC5A9Q2M3M2 681 aa5.17□□□□□ -1.58
SMC4-224ENST00000494612 P3H1Q32P28 736 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms