RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 FNDC1Q4ZHG4 1894 aaPredicted RBP7.09□□□□□ -1.27
MSH5-217ENST00000494458 YJEFN3A6XGL0 299 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 E7ENQ6 273 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 APOC4-APOC2K7ER74 178 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 LIASO43766 372 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 TADA2AO75478 443 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 ZMYND10O75800 440 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 BAIAP3O94812 1187 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 SEC31AO94979 1220 aaKnown RBP7.09□□□□□ -1.27
MSH5-217ENST00000494458 ZBED1O96006 694 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 APOC2P02655 101 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 ITGAVP06756 1048 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 LINC00271P0C7V0 271 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 L1CAMP32004 1257 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 HSPA9P38646 679 aaKnown RBP7.09□□□□□ -1.27
MSH5-217ENST00000494458 OR1G1P47890 313 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 HCAR3P49019 387 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 GATMP50440 423 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 LBX1P52954 281 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 BCAR1P56945 870 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 MAP3K7CLP57077 242 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 MRPS25P82663 173 aaKnown RBP7.09□□□□□ -1.27
MSH5-217ENST00000494458 RBM10P98175 930 aaKnown RBP7.09□□□□□ -1.27
MSH5-217ENST00000494458 TSPY1Q01534 308 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 GUCY2DQ02846 1103 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 ADIGQ0VDE8 80 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 PTK6Q13882 451 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 DPYSL3Q14195 570 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 SYPL2Q5VXT5 272 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 SLC8B1Q6J4K2 584 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 FUT10Q6P4F1 479 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 ZDHHC24Q6UX98 284 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 C4orf50Q6ZRC1 276 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 HFE2Q6ZVN8 426 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 C16orf59Q7L2K0 433 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 HDXQ7Z353 690 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 NECAB2Q7Z6G3 386 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 RELL1Q8IUW5 271 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 DEFB106AQ8N104 65 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 LRRC43Q8N309 656 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 PQLC3Q8N755 202 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 TTC13Q8NBP0 860 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 C2orf15Q8WU43 125 aaKnown RBP7.09□□□□□ -1.27
MSH5-217ENST00000494458 FAM172AQ8WUF8 416 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 BCL7CQ8WUZ0 217 aaPredicted RBP7.09□□□□□ -1.27
MSH5-217ENST00000494458 ART4Q93070 314 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 RNF25Q96BH1 459 aaPredicted RBP7.09□□□□□ -1.27
MSH5-217ENST00000494458 RTP4Q96DX8 246 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 IGSF21Q96ID5 467 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 SPATA17Q96L03 361 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 FAM193BQ96PV7 902 aaPredicted RBP7.09□□□□□ -1.27
MSH5-217ENST00000494458 RNF157Q96PX1 679 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 ZNF670Q9BS34 389 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 VN1R3Q9BXE9 311 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 ULBP1Q9BZM6 244 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 RAB17Q9H0T7 212 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 LRRC4Q9HBW1 653 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 DMAP1Q9NPF5 467 aaPredicted RBP7.09□□□□□ -1.27
MSH5-217ENST00000494458 WHRNQ9P202 907 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 FZD10Q9ULW2 581 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 USTQ9Y2C2 406 aa7.09□□□□□ -1.27
MSH5-217ENST00000494458 SCN5AQ14524 2016 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 MICAL3Q7RTP6 2002 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 SF3B1O75533 1304 aaKnown RBP eCLIP7.08□□□□□ -1.28
MSH5-217ENST00000494458 PI4K2BG5E9Z4 385 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 H7C4K7 107 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 I6L893 689 aaPredicted RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 AGPSO00116 658 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 DAPK3O43293 454 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 PRPSAP2O60256 369 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 LILRB3O75022 631 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 GRAP2O75791 330 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 ABLIM3O94929 683 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 F9P00740 461 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 LTFP02788 710 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 KRT1P04264 644 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 CD48P09326 243 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 ZDHHC11BP0C7U3 371 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 KRT10P13645 584 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 LCP1P13796 627 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 ITIH2P19823 946 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 BDNFP23560 247 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 ADRA1BP35368 520 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 KCNJ1P48048 391 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 CXCR3P49682 368 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 VASPP50552 380 aaPredicted RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 ZNF135P52742 658 aaPredicted RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 VCPP55072 806 aaKnown RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 HTRA4P83105 476 aaPredicted RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 LMNB2Q03252 620 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 RNASELQ05823 741 aaKnown RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 CASP8Q14790 479 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 CA9Q16790 459 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 PAN2Q504Q3 1202 aaKnown RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 KCNT1Q5JUK3 1230 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 FAM171A1Q5VUB5 890 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 SNX30Q5VWJ9 437 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 ZNF280DQ6N043 979 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 RSPO2Q6UXX9 243 aaPredicted RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 ANKS3Q6ZW76 656 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms