RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 TMEM120AQ9BXJ8 343 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 PTPN4P29074 926 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 SHMT1P34896 483 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 MTDHQ86UE4 582 aaKnown RBP19.74■□□□□ 0.75
COL27A1-207ENST00000494090 P3H2Q8IVL5 708 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 VCPIP1Q96JH7 1222 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 RUVBL2Q9Y230 463 aaKnown RBP19.74■□□□□ 0.75
COL27A1-207ENST00000494090 PCDHA3Q9Y5H8 950 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.74■□□□□ 0.75
COL27A1-207ENST00000494090 UBOX5O94941 541 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 TRPC1P48995 793 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 CLCN3P51790 818 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 AQP5P55064 265 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 ERVK-9P63128 1117 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 ZNF284Q2VY69 593 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 CTXN3Q4LDR2 81 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 METTL7BQ6UX53 244 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 BLOC1S5Q8TDH9 187 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 RRN3Q9NYV6 651 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 KANSL3Q9P2N6 904 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 AP4E1Q9UPM8 1137 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 ZMYM2Q9UBW7 1377 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 LZTS3O60299 673 aaPredicted RBP19.74■□□□□ 0.75
COL27A1-207ENST00000494090 DAB1O75553 588 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 CRTAMO95727 393 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 GUCA1CO95843 209 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 AMPD2Q01433 879 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 PTPN11Q06124 597 aaPredicted RBP19.74■□□□□ 0.75
COL27A1-207ENST00000494090 PHKG1Q16816 387 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 PLEKHM3Q6ZWE6 761 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 HERC6Q8IVU3 1022 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 BLOC1S4Q9NUP1 217 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 GPATCH2LQ9NWQ4 482 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 PXDNQ92626 1479 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 F8W810 466 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 VIL1P09327 827 aaKnown RBP19.73■□□□□ 0.75
COL27A1-207ENST00000494090 MLNP12872 115 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 NT5DC3Q86UY8 548 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 TATDN2Q93075 761 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 ECSITQ9BQ95 431 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 SHCBP1LQ9BZQ2 653 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 RMND5AQ9H871 391 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.73■□□□□ 0.75
COL27A1-207ENST00000494090 SLCO1B7G3V0H7 640 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 NFIBO00712 420 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 SERPINB3P29508 390 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 ITGA9Q13797 1035 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 AMHR2Q16671 573 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 SGO1Q5FBB7 561 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 CHST12Q9NRB3 414 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 DNAJC16Q9Y2G8 782 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 SLITRK3O94933 977 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 GCNT1Q02742 428 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 GLRA4Q5JXX5 417 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 SPDYCQ5MJ68 293 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 FAM83AQ86UY5 434 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 CREG2Q8IUH2 290 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 MYO1HQ8N1T3 1032 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 ACTL9Q8TC94 416 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 ATXN2LQ8WWM7 1075 aaKnown RBP19.73■□□□□ 0.75
COL27A1-207ENST00000494090 SYTL2Q9HCH5 934 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 KRCC1Q9NPI7 259 aaPredicted RBP19.73■□□□□ 0.75
COL27A1-207ENST00000494090 VCAM1P19320 739 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 EPHB3P54753 998 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 ZNF844Q08AG5 666 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 CSTF3Q12996 717 aaKnown RBP19.73■□□□□ 0.75
COL27A1-207ENST00000494090 DNAAF5Q86Y56 855 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 RXFP2Q8WXD0 754 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 L3MBTL3Q96JM7 780 aaPredicted RBP19.73■□□□□ 0.75
COL27A1-207ENST00000494090 RNF112Q9ULX5 631 aa19.73■□□□□ 0.75
COL27A1-207ENST00000494090 DDX3XO00571 662 aaKnown RBP eCLIP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 MAP3K6O95382 1288 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 CKMP06732 381 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 RASA2Q15283 850 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 DEPDC1Q5TB30 811 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 ARHGEF19Q8IW93 802 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 HDAC7Q8WUI4 952 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 SPIRE2Q8WWL2 714 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 KCTD10Q9H3F6 313 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 SCUBE2Q9NQ36 999 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 ITGA11Q9UKX5 1188 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 SOX13Q9UN79 622 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 SUPT7LO94864 414 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 PSMA4P25789 261 aaKnown RBP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 RPL21P46778 160 aaKnown RBP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 RAP1GAPP47736 663 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 ITIH5Q86UX2 942 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 SLC5A5Q92911 643 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 GBA2Q9HCG7 927 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 TTLL13PA6NNM8 815 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 C2CD2LO14523 706 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 SERPINB5P36952 375 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 PRIM2P49643 509 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 SEL1L3Q68CR1 1132 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 OTOP1Q7RTM1 612 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 NIPA1Q7RTP0 329 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 KANSL1LA0AUZ9 987 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 E7ENQ6 273 aa19.72■□□□□ 0.75
COL27A1-207ENST00000494090 DNALI1O14645 258 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-207ENST00000494090 XPO1O14980 1071 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms