RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 RABL3Q5HYI8 236 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 SLC9A4Q6AI14 798 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 ARMC6Q6NXE6 501 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 MSANTD2Q6P1R3 559 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 C11orf44Q8N8P7 122 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 HMGB4Q8WW32 186 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 EDAQ92838 391 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 HAPLN3Q96S86 360 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 CHODLQ9H9P2 273 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 NOD2Q9HC29 1040 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 AKIP1Q9NQ31 210 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 KCND3Q9UK17 655 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 DRG1Q9Y295 367 aaKnown RBP6.98□□□□□ -1.29
SMC2-205ENST00000493955 DERAQ9Y315 318 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 RRP7AQ9Y3A4 280 aaKnown RBP6.98□□□□□ -1.29
SMC2-205ENST00000493955 ITIH6Q6UXX5 1313 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 OTOL1A6NHN0 477 aaPredicted RBP6.97□□□□□ -1.29
SMC2-205ENST00000493955 ZAR1LA6NP61 321 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 EXOC5O00471 708 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 PPM1DO15297 605 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 WDR47O94967 919 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 LARGE1O95461 756 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 TFRCP02786 760 aaKnown RBP6.97□□□□□ -1.29
SMC2-205ENST00000493955 CD19P15391 556 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 FAM189BP81408 668 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 SP2Q02086 613 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 LY6KQ17RY6 165 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 TMEM196Q5HYL7 178 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 DGAT2L7PQ6IED9 249 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 BBS12Q6ZW61 710 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 SYT13Q7L8C5 426 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 HDAC2Q92769 488 aaKnown RBP6.97□□□□□ -1.29
SMC2-205ENST00000493955 XYLT2Q9H1B5 865 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 JMJD4Q9H9V9 463 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 TRIM36Q9NQ86 728 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 JAG2Q9Y219 1238 aa6.97□□□□□ -1.29
SMC2-205ENST00000493955 B4E171 279 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 CDKL5O76039 1030 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 CNPP09543 421 aaKnown RBP6.96□□□□□ -1.3
SMC2-205ENST00000493955 ATP1A3P13637 1013 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 PPP3CBP16298 524 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 TSPAN7P41732 249 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 MAGEA10P43363 369 aaPredicted RBP6.96□□□□□ -1.3
SMC2-205ENST00000493955 GSTM5P46439 218 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 EIF5P55010 431 aaKnown RBP6.96□□□□□ -1.3
SMC2-205ENST00000493955 RESTQ13127 1097 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 ANKRD1Q15327 319 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 BEAN1Q3B7T3 259 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 PIK3AP1Q6ZUJ8 805 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 METTL25Q8N6Q8 603 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 B3GALNT2Q8NCR0 500 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 SUPT20HQ8NEM7 779 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 PAAF1Q9BRP4 392 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 ZNF768Q9H5H4 540 aaKnown RBP6.96□□□□□ -1.3
SMC2-205ENST00000493955 GLOD4Q9HC38 313 aa6.96□□□□□ -1.3
SMC2-205ENST00000493955 LIN7CQ9NUP9 197 aaKnown RBP6.96□□□□□ -1.3
SMC2-205ENST00000493955 FBXO2Q9UK22 296 aaPredicted RBP6.96□□□□□ -1.3
SMC2-205ENST00000493955 GXYLT2A0PJZ3 443 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 PRICKLE3O43900 615 aaPredicted RBP6.95□□□□□ -1.3
SMC2-205ENST00000493955 BAIAP3O94812 1187 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 VNN1O95497 513 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 LDHCP07864 332 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 PDHA1P08559 390 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 CAPN3P20807 821 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 DRD1P21728 446 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 PBX1P40424 430 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 RBM5P52756 815 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMC2-205ENST00000493955 TOB2Q14106 344 aaPredicted RBP6.95□□□□□ -1.3
SMC2-205ENST00000493955 TBC1D1Q86TI0 1168 aaPredicted RBP6.95□□□□□ -1.3
SMC2-205ENST00000493955 DTX2Q86UW9 622 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 LRRC71Q8N4P6 559 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 USP38Q8NB14 1042 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 ADOQ96SZ5 270 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 EIF3CQ99613 913 aaKnown RBP6.95□□□□□ -1.3
SMC2-205ENST00000493955 GPR63Q9BZJ6 419 aa6.95□□□□□ -1.3
SMC2-205ENST00000493955 NKX1-2Q9UD57 310 aaPredicted RBP6.95□□□□□ -1.3
SMC2-205ENST00000493955 FAM90A20PA6NIJ5 464 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 CTIFO43310 598 aaKnown RBP6.94□□□□□ -1.3
SMC2-205ENST00000493955 IFIT1P09914 478 aaKnown RBP6.94□□□□□ -1.3
SMC2-205ENST00000493955 TMEM225BP0DP42 221 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 DDX6P26196 483 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMC2-205ENST00000493955 ACRV1P26436 265 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 NR1H2P55055 460 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 EIF4A1P60842 406 aaKnown RBP6.94□□□□□ -1.3
SMC2-205ENST00000493955 MTAPQ13126 283 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 ICAM4Q14773 271 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 ST3GAL2Q16842 350 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 CTXN3Q4LDR2 81 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 DSTYKQ6XUX3 929 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 CAND1Q86VP6 1230 aaKnown RBP6.94□□□□□ -1.3
SMC2-205ENST00000493955 TSPYL6Q8N831 410 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 SLC22A17Q8WUG5 538 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 SOCS4Q8WXH5 440 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 GLG1Q92896 1179 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 HVCN1Q96D96 273 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 RSPRY1Q96DX4 576 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 RRP36Q96EU6 259 aaKnown RBP6.94□□□□□ -1.3
SMC2-205ENST00000493955 MCRS1Q96EZ8 462 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 TEPSINQ96N21 525 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms