RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ZBTB45Q96K62 511 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-216ENST00000493758 ASB2Q96Q27 587 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 ZNF700Q9H0M5 742 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 TFCP2L1Q9NZI6 479 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 FER1L4A9Z1Z3 1794 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 CES2O00748 559 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 PDE8BO95263 885 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 MT-CO3P00414 261 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 TUBB4AP04350 444 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 CREB1P16220 341 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 EGR1P18146 543 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 AK2P54819 239 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 EIF4A1P60842 406 aaKnown RBP5.1□□□□□ -1.59
ITGB1-216ENST00000493758 MTAPQ13126 283 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 FHL3Q13643 280 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 CERKLQ49MI3 558 aaPredicted RBP5.1□□□□□ -1.59
ITGB1-216ENST00000493758 KLHDC7AQ5VTJ3 777 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 NEK8Q86SG6 692 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 CHSY1Q86X52 802 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 LIX1LQ8IVB5 337 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 GALNT16Q8N428 558 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 CCDC33Q8N5R6 958 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 SUN3Q8TAQ9 357 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 EDC3Q96F86 508 aaKnown RBP5.1□□□□□ -1.59
ITGB1-216ENST00000493758 KAZALD1Q96I82 304 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 NECTIN3Q9NQS3 549 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 PHTF1Q9UMS5 762 aa5.1□□□□□ -1.59
ITGB1-216ENST00000493758 WDR47O94967 919 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 NBPF7P0C2Y1 421 aaPredicted RBP5.09□□□□□ -1.59
ITGB1-216ENST00000493758 IDEP14735 1019 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 TNFSF4P23510 183 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 DGKQP52824 942 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 CFHR3Q02985 330 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 GPS1Q13098 491 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 GRM1Q13255 1194 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 PICALMQ13492 652 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 PMS2P11Q13670 270 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 FAM187BQ17R55 369 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 SLC35G1Q2M3R5 365 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 DGKKQ5KSL6 1271 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 FAXCQ5TGI0 409 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 IZUMO3Q5VZ72 239 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 HIBCHQ6NVY1 386 aaPredicted RBP5.09□□□□□ -1.59
ITGB1-216ENST00000493758 TLDC1Q6P9B6 456 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 CRTC1Q6UUV9 634 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 ZNF813Q6ZN06 617 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 C1QL2Q7Z5L3 287 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 CCDC28AQ8IWP9 274 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 ADAMTS18Q8TE60 1221 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 PNISRQ8TF01 805 aaKnown RBP5.09□□□□□ -1.59
ITGB1-216ENST00000493758 VPS50Q96JG6 964 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 SNX27Q96L92 541 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 TBCBQ99426 244 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 NUDT22Q9BRQ3 303 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 C1QTNF7Q9BXJ2 289 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 RNF26Q9BY78 433 aaPredicted RBP5.09□□□□□ -1.59
ITGB1-216ENST00000493758 TMOD4Q9NZQ9 345 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 SEMA5BQ9P283 1151 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 CA14Q9ULX7 337 aa5.09□□□□□ -1.59
ITGB1-216ENST00000493758 SPATA31A1Q5TZJ5 1347 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 ATF7P17544 494 aaPredicted RBP5.08□□□□□ -1.6
ITGB1-216ENST00000493758 NTSR1P30989 418 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 ATICP31939 592 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 DNASE1L3Q13609 305 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 ATP1A4Q13733 1029 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 LONRF1Q17RB8 773 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 AASDHQ4L235 1098 aaPredicted RBP5.08□□□□□ -1.6
ITGB1-216ENST00000493758 KSR2Q6VAB6 950 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 CLASRPQ8N2M8 674 aaKnown RBP5.08□□□□□ -1.6
ITGB1-216ENST00000493758 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.08□□□□□ -1.6
ITGB1-216ENST00000493758 DEPTORQ8TB45 409 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 ABHD5Q8WTS1 349 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 GJA10Q969M2 543 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 HIC2Q96JB3 615 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 TBC1D23Q9NUY8 699 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 MGAT4CQ9UBM8 478 aa5.08□□□□□ -1.6
ITGB1-216ENST00000493758 ZNF804BA4D1E1 1349 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 SMIM22K7EJ46 135 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 DHHO43323 396 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 EXOC3O60645 756 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 TMEM225BP0DP42 221 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 CYP2A6P11509 494 aaPredicted RBP5.07□□□□□ -1.6
ITGB1-216ENST00000493758 EPHB2P29323 1055 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 GPC5P78333 572 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 TXNL4AP83876 142 aaKnown RBP5.07□□□□□ -1.6
ITGB1-216ENST00000493758 NSUN2Q08J23 767 aaKnown RBP eCLIP5.07□□□□□ -1.6
ITGB1-216ENST00000493758 KCNJ12Q14500 433 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 EZH2Q15910 746 aaKnown RBP5.07□□□□□ -1.6
ITGB1-216ENST00000493758 MAPKAPK3Q16644 382 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 ARL13BQ3SXY8 428 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.07□□□□□ -1.6
ITGB1-216ENST00000493758 MORN5Q5VZ52 161 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 ZKSCAN2Q63HK3 967 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 FAM90A2PQ658T7 463 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 CLEC9AQ6UXN8 241 aa5.07□□□□□ -1.6
ITGB1-216ENST00000493758 C12orf76Q8N812 135 aaPredicted RBP5.07□□□□□ -1.6
ITGB1-216ENST00000493758 PNLDC1Q8NA58 520 aaKnown RBP5.07□□□□□ -1.6
ITGB1-216ENST00000493758 MAFAQ8NHW3 353 aaPredicted RBP5.07□□□□□ -1.6
ITGB1-216ENST00000493758 LRRC46Q96FV0 321 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms